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MH590603.1__AXH70549.1__SEA_DAREDEVIL_163__00163
Bact-VirMH590603.1__AXH70549.1__SEA_DAREDEVIL_163__00163
Identity
- Accession:
- MH590603 ↗
- Kingdom:
- phage
Quality
77.3
mean pLDDT
Taxonomy
TaxID: 2283286
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-53
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lxrF00 | 1.10.4120.20 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › | 0.73 | 51.0 | 3.42e-01 | 73.1% | 69.1% |
| 3mx7A00 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.66 | 56.0 | 4.80e-01 | 100.0% | 65.6% |
| 7dpyB01 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.66 | 57.0 | 4.92e-01 | 100.0% | 81.9% |
| 3rv0B03 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.65 | 54.0 | 4.75e-01 | 94.2% | 78.5% |
| 2kr7A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.64 | 37.0 | 3.65e-01 | 94.2% | 50.9% |
| 1ygyB03 | 3.30.1330.90 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › D-3-phosphoglycerate dehydrogenase; domain 3 | 0.62 | 46.0 | 3.45e-01 | 84.6% | 30.2% |
| 2ra8A01 | 2.20.140.10 | Mainly Beta › Single Sheet › q64v53_bacfr protein fold › WGR domain | 0.62 | 51.0 | 4.64e-01 | 98.1% | 83.8% |
| 1o8vA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.61 | 43.0 | 3.30e-01 | 78.8% | 30.1% |
| 2zkmX01 | 2.30.29.240 | Mainly Beta › Roll › PH-domain like › | 0.61 | 51.0 | 3.49e-01 | 98.1% | 46.6% |
| 1x05A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 49.0 | 3.83e-01 | 96.2% | 62.8% |
| 3h8zA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 43.0 | 4.49e-01 | 98.1% | 85.4% |
| 2dhkA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 50.0 | 4.14e-01 | 98.1% | 74.0% |
| 4chjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 48.0 | 3.84e-01 | 100.0% | 57.3% |
| 7obmA02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.58 | 51.0 | 3.22e-01 | 98.1% | 49.6% |
| 4fvkA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.58 | 47.0 | 2.93e-01 | 100.0% | 22.1% |
| 2qzuA02 | 3.30.1120.10 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.57 | 42.0 | 3.65e-01 | 80.8% | 52.9% |
| 1mdcA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 40.0 | 3.15e-01 | 80.8% | 32.8% |
| 5os9A00 | 2.40.330.10 | Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain | 0.55 | 49.0 | 3.82e-01 | 100.0% | 57.4% |
| 2ltrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 42.0 | 3.58e-01 | 94.2% | 53.3% |
| 4xtvB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 39.0 | 4.05e-01 | 100.0% | 85.4% |
| 3bgtA01 | 2.40.400.10 | Mainly Beta › Beta Barrel › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like | 0.54 | 46.0 | 3.05e-01 | 100.0% | 60.6% |
| 1a1xA00 | 2.40.15.10 | Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 | 0.53 | 37.0 | 3.15e-01 | 80.8% | 84.0% |
| 1wrjA01 | 3.30.160.70 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Methylated DNA-protein cysteine methyltransferase domain | 0.52 | 43.0 | 3.99e-01 | 100.0% | 71.6% |
| 1t6cA02 | 3.30.420.150 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 | 0.52 | 42.0 | 3.02e-01 | 98.1% | 77.9% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3979087 | 4100.1.1.7 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › PF27115 | 0.72 | 51.0 | 4.68e-01 | 92.3% | 57.1% |
| 3601907 | 5.1.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed | 0.71 | 50.0 | 3.43e-01 | 82.7% | 21.2% |
| 3212468 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.71 | 60.0 | 4.94e-01 | 100.0% | 55.0% |
| 3586488 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.69 | 58.0 | 3.52e-01 | 96.2% | 13.6% |
| None | — | 0.68 | 59.0 | 3.40e-01 | 100.0% | 21.4% | |
| 4119222 | 375.1.1.135 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Lar_restr_allev | 0.68 | 56.0 | 5.71e-01 | 92.3% | 100.0% |
| 3578128 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.67 | 56.0 | 5.53e-01 | 98.1% | 96.4% |
| 3797569 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.67 | 55.0 | 5.46e-01 | 98.1% | 98.2% |
| 3740081 | 719.1.1.0 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain | 0.66 | 58.0 | 4.55e-01 | 100.0% | 77.3% |
| 3600084 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.65 | 56.0 | 3.49e-01 | 96.2% | 18.1% |
| 3404205 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.65 | 46.0 | 3.94e-01 | 75.0% | 100.0% |
| 5065441 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 48.0 | 4.78e-01 | 82.7% | 98.1% |
| 3360657 | 5.3.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II | 0.63 | 52.0 | 4.19e-01 | 100.0% | 83.5% |
| 5048797 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.62 | 54.0 | 4.51e-01 | 100.0% | 63.2% |
| 5004341 | 109.2.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid | 0.61 | 49.0 | 2.85e-01 | 92.3% | 88.6% |
| 2658868 | 265.1.1.1 ↗ | a+b two layers › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › Levi_coat | 0.58 | 48.0 | 3.72e-01 | 100.0% | 67.2% |
| 3699020 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.56 | 42.0 | 2.73e-01 | 90.4% | 80.0% |
| 3466584 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 41.0 | 3.88e-01 | 86.5% | 87.7% |
| 3581945 | 220.1.1.132 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C | 0.53 | 39.0 | 3.78e-01 | 88.5% | 71.7% |
| 5030311 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 36.0 | 3.62e-01 | 75.0% | 76.4% |