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MH595538.1__AXH70874.1__X__00133

Bact-Vir

MH595538.1__AXH70874.1__X__00133

Identity

Accession:
MH595538 ↗
Kingdom:
phage

Quality

83.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 260-344
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03895.22 best YadA_anchor 28.3 2.00e-06 84.7% 75.0%
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qomB00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.71 62.0 4.31e-01 94.1% 67.3%
1jmxA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.71 47.0 4.30e-01 82.4% 52.3%
5dl8A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.70 61.0 3.86e-01 92.9% 26.1%
6z9cA01 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.70 50.0 4.45e-01 75.3% 75.4%
6fokB01 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.70 64.0 3.76e-01 100.0% 33.4%
4epaA00 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.70 62.0 3.70e-01 98.8% 53.2%
3vy8X00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.69 60.0 3.97e-01 94.1% 50.1%
2porA00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.69 60.0 4.06e-01 94.1% 54.2%
3efmA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.68 59.0 3.66e-01 91.8% 22.9%
2c4iA01 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.68 48.0 4.34e-01 75.3% 53.4%
2vdfA00 2.40.128.100 Mainly Beta › Beta Barrel › Lipocalin › OPCA outer membrane adhesin/invasin 0.68 62.0 4.51e-01 100.0% 43.1%
2f1vA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.67 60.0 4.70e-01 100.0% 61.5%
3qlbA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.67 58.0 3.48e-01 91.8% 25.1%
4k7rA02 2.20.200.10 Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.67 47.0 4.96e-01 72.9% 92.2%
2ynkA00 2.40.160.130 Mainly Beta › Beta Barrel › Porin › Capsule assembly protein Wzi 0.67 57.0 3.59e-01 92.9% 25.6%
5fokA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.66 56.0 3.40e-01 91.8% 28.8%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.66 59.0 4.78e-01 97.6% 59.4%
1i78B00 2.40.128.90 Mainly Beta › Beta Barrel › Lipocalin › OMPT-like 0.65 58.0 3.99e-01 98.8% 41.1%
5e1vB00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.64 48.0 3.32e-01 78.8% 40.9%
3njtA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.63 56.0 3.81e-01 97.6% 88.2%
3g7gH00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.62 56.0 4.58e-01 100.0% 55.3%
1bh3A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.62 58.0 3.90e-01 100.0% 41.5%
4e1sA00 2.40.160.160 Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain 0.62 56.0 4.01e-01 98.8% 35.1%
4bj8K00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.60 54.0 4.85e-01 100.0% 70.8%
1qj8A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.60 54.0 4.50e-01 100.0% 68.2%
1fw3A00 2.40.230.10 Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Phospholipase A1 0.60 48.0 3.47e-01 88.2% 40.0%
2w4yA00 2.40.160.220 Mainly Beta › Beta Barrel › Porin › 0.60 47.0 4.10e-01 82.4% 63.9%
2imjD01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 41.0 3.48e-01 71.8% 44.4%
4ktpA01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.59 54.0 3.81e-01 98.8% 63.2%
4puxA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.59 52.0 4.28e-01 98.8% 55.4%
3en2A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 35.0 3.44e-01 97.6% 53.8%
3ub1A01 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 43.0 3.70e-01 77.6% 90.4%
4rlcA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.58 52.0 4.44e-01 98.8% 63.0%
1nqnA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.58 50.0 4.50e-01 95.3% 72.9%
1tk1A00 3.40.1500.10 Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › Coproporphyrinogen III oxidase, aerobic 0.58 46.0 3.49e-01 88.2% 81.3%
1wnhA01 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 40.0 3.80e-01 71.8% 83.0%
4k02A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 50.0 4.31e-01 94.1% 92.1%
6yfiB01 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.57 44.0 3.78e-01 82.4% 55.6%
2pfcA00 3.10.129.30 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Rv0098, thioesterase-like hot dog domain 0.56 51.0 4.07e-01 97.6% 85.6%
4kz1A00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.56 41.0 3.55e-01 77.6% 79.3%
3k8aB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 34.0 3.28e-01 98.8% 50.5%
1ar0A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 40.0 3.57e-01 78.8% 81.6%
4ybvA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 46.0 4.11e-01 100.0% 66.1%
1uliB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 38.0 3.05e-01 74.1% 79.7%
3zpmA00 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.54 47.0 3.61e-01 100.0% 70.1%
2gvhC01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 47.0 4.08e-01 100.0% 66.2%
3b7kC02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 47.0 4.38e-01 100.0% 82.7%
1aqbA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 41.0 3.28e-01 95.3% 40.6%
2gvhB02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 48.0 4.29e-01 100.0% 74.4%
3gp6A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.52 44.0 3.75e-01 98.8% 65.2%
1zkiA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 46.0 3.95e-01 92.9% 86.4%
1y7uA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 46.0 3.73e-01 100.0% 59.8%
1jkgA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 40.0 3.39e-01 82.4% 52.5%
3lydA01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.51 43.0 3.61e-01 90.6% 70.4%
3butA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 45.0 3.96e-01 98.8% 82.4%
3v0rA01 2.40.350.20 Mainly Beta › Beta Barrel › AOC barrel-like › 0.51 36.0 3.29e-01 100.0% 54.2%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3387368 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.80 64.0 4.37e-01 83.5% 37.9%
4285298 5084.1.1.29 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF27340 0.76 59.0 4.46e-01 81.2% 52.1%
4133928 230.1.1.5 a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 0.75 54.0 4.83e-01 76.5% 95.8%
4985264 230.1.1.5 a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 0.74 56.0 4.77e-01 80.0% 98.5%
4236774 230.1.1.5 a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 0.74 54.0 4.71e-01 76.5% 94.4%
2103480 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.74 61.0 4.13e-01 88.2% 29.9%
4196358 230.1.1.5 a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 0.74 53.0 4.77e-01 76.5% 95.0%
4484391 230.1.1.5 a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 0.73 53.0 4.69e-01 76.5% 87.2%
4978573 230.1.1.5 a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 0.73 53.0 4.52e-01 76.5% 85.9%
4240255 230.1.1.5 a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 0.73 52.0 4.71e-01 75.3% 93.0%
3615728 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.72 57.0 3.56e-01 82.4% 42.9%
4116729 5084.1.1.6 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OprF 0.72 55.0 4.32e-01 80.0% 43.5%
4354607 230.1.1.5 a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 0.72 53.0 4.74e-01 77.6% 99.2%
None 0.72 65.0 4.69e-01 100.0% 89.5%
4488222 230.1.1.5 a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 0.71 51.0 4.47e-01 76.5% 84.6%
4172289 230.1.1.5 a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 0.71 50.0 4.53e-01 75.3% 95.0%
3967063 5084.1.1.11 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Phenol_MetA_deg 0.71 64.0 4.41e-01 100.0% 70.7%
4119784 230.1.1.5 a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 0.70 51.0 4.55e-01 77.6% 100.0%
4200093 5084.5.1.9 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_O_P 0.70 64.0 4.12e-01 100.0% 67.6%
4305190 230.1.1.5 a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 0.69 50.0 4.37e-01 76.5% 93.1%
5065294 4051.1.1.0 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz 0.68 59.0 4.64e-01 92.9% 51.2%
3975352 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.68 63.0 5.10e-01 100.0% 58.2%
3838829 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.68 52.0 4.02e-01 81.2% 40.5%
4622159 5084.5.1.35 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_2 0.68 63.0 4.11e-01 100.0% 88.5%
4586646 230.1.1.5 a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 0.67 50.0 4.41e-01 78.8% 96.0%
4458963 5084.5.1.1 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_1 0.67 61.0 3.96e-01 98.8% 30.0%
4265077 5084.1.1.34 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › DUF2715 0.67 61.0 4.87e-01 98.8% 58.7%
3933957 4051.1.1.1 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.66 60.0 4.79e-01 97.6% 56.2%
4948537 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.66 49.0 3.20e-01 76.5% 37.5%
4668983 4051.1.1.0 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz 0.66 57.0 4.61e-01 94.1% 55.0%
3173251 4051.1.1.1 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.65 56.0 4.45e-01 94.1% 55.3%
3977398 5084.1.1.16 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Ail_Lom 0.64 59.0 4.76e-01 100.0% 58.1%
4025861 4051.1.1.1 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.64 59.0 4.58e-01 97.6% 51.8%
3925444 5087.3.1.0 beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C 0.64 54.0 4.00e-01 90.6% 46.4%
3969607 5084.1.1.11 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Phenol_MetA_deg 0.64 57.0 3.74e-01 94.1% 27.6%
3788782 2004.1.1.199 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23,SbcC_Walker_B 0.64 47.0 2.91e-01 77.6% 24.1%
4042627 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.64 57.0 4.53e-01 98.8% 57.7%
3975660 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.64 56.0 4.25e-01 100.0% 54.2%
3703955 1100.1.1.1 beta meanders › TIP41-like protein › TIP41-like protein › TIP41-like protein › TIP41 0.64 58.0 4.06e-01 100.0% 35.4%
3840092 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.63 58.0 3.78e-01 100.0% 93.5%
4928614 9.13.1.0 beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like 0.63 53.0 4.60e-01 98.8% 60.2%
4945859 230.1.1.5 a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 0.62 45.0 3.95e-01 76.5% 89.2%
4014154 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.62 48.0 4.02e-01 83.5% 73.1%
3254046 243.1.1.9 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF1348 0.61 48.0 3.97e-01 84.7% 72.1%
3185413 11.1.1.926 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7136 0.60 52.0 4.46e-01 97.6% 94.3%
3272662 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.60 51.0 3.49e-01 92.9% 62.0%
4283551 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.59 51.0 3.90e-01 100.0% 55.2%
4888072 327.16.1.1 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin 0.58 50.0 3.78e-01 97.6% 41.7%
3187645 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.58 51.0 4.06e-01 98.8% 82.3%
3184149 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.57 45.0 3.86e-01 84.7% 77.0%
3217509 243.1.1.46 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF5382 0.57 46.0 3.73e-01 84.7% 80.7%
3373981 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.57 44.0 3.24e-01 97.6% 31.8%
4015830 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 45.0 2.82e-01 87.1% 31.0%
4927707 243.1.1.25 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 0.56 42.0 3.61e-01 81.2% 85.0%
4512746 5084.1.1.9 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PagL 0.56 49.0 4.02e-01 98.8% 62.0%
3520733 5.1.4.16 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A 0.52 47.0 3.02e-01 98.8% 24.2%
3441397 11.1.1.51 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LEA_2 0.52 45.0 3.81e-01 98.8% 93.3%
3217156 243.1.1.46 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF5382 0.52 46.0 3.85e-01 96.5% 80.7%
4149046 243.3.1.60 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF5385 0.51 36.0 3.57e-01 92.9% 68.9%
2553892 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.51 39.0 3.52e-01 83.5% 81.7%
3852438 883.1.1.24 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › PF29321 0.50 43.0 3.47e-01 100.0% 52.8%