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MH595538.1__AXH70879.1__X__00138

Bact-Vir

MH595538.1__AXH70879.1__X__00138

Identity

Accession:
MH595538 ↗
Kingdom:
phage

Quality

90.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_BONAISHI

TaxID: 2283011

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-66_143-218
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pusA05 1.10.1740.80 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › 0.66 32.0 4.07e-01 92.9% 78.8%
1fioA00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 30.0 2.70e-01 94.3% 36.3%
1ah7A00 1.10.575.10 Mainly Alpha › Orthogonal Bundle › P1 Nuclease › P1 Nuclease 0.51 38.0 3.20e-01 78.6% 89.0%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4012019 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.68 43.0 5.07e-01 92.9% 93.7%
3959078 5081.1.1.0 ↗ alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like 0.56 38.0 3.27e-01 70.0% 76.7%
5008692 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.52 34.0 3.80e-01 84.3% 83.6%
4679374 1075.5.1.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE 0.51 37.0 3.12e-01 74.3% 81.7%
D2 high residues 75-130
PDB
Domain cluster: representative
D3 high residues 229-301
PDB
Domain cluster: rep: MW388005.1__QQO39020.1__X__00046__D8-66
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01471.24 best PG_binding_1 65.4 6.10e-18 78.1% 96.5%