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MH595538.1__AXH70907.1__X__00166
Bact-VirMH595538.1__AXH70907.1__X__00166
Identity
- Accession:
- MH595538 ↗
- Kingdom:
- phage
Quality
47.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-57
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3n3fA01 | 3.40.1620.70 | Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › | 0.78 | 55.0 | 6.01e-01 | 98.1% | 93.0% |
| 3hshE00 | 3.40.1620.70 | Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › | 0.77 | 55.0 | 5.50e-01 | 100.0% | 74.5% |
| 1yu0A01 | 2.10.10.30 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.70 | 49.0 | 5.01e-01 | 100.0% | 78.4% |
| 3vx8A02 | 3.40.140.70 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Ubiquitin-like modifier-activating enzyme ATG7 N-terminal domain | 0.56 | 48.0 | 3.48e-01 | 100.0% | 48.8% |
| 3ednA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.56 | 48.0 | 3.66e-01 | 100.0% | 49.3% |
| 3mazA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.54 | 43.0 | 3.63e-01 | 100.0% | 50.5% |
| 3h09A03 | 3.30.160.280 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 47.0 | 3.97e-01 | 100.0% | 67.0% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3917719 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.83 | 60.0 | 6.49e-01 | 100.0% | 91.1% |
| 1107990 | 3761.1.1.1 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Mtd_N | 0.70 | 49.0 | 5.04e-01 | 100.0% | 80.0% |
| 3651436 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.64 | 56.0 | 3.76e-01 | 100.0% | 26.2% |
| 3517867 | 214.1.1.9 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7063 | 0.64 | 51.0 | 3.92e-01 | 100.0% | 37.7% |
| 3684509 | 2006.1.1.7 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP | 0.64 | 55.0 | 3.75e-01 | 100.0% | 27.1% |
| 3477642 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.62 | 49.0 | 3.82e-01 | 100.0% | 40.0% |
| 3508119 | 214.1.1.9 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7063 | 0.60 | 48.0 | 3.77e-01 | 100.0% | 40.8% |
| 3518947 | 214.1.1.10 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7145 | 0.60 | 45.0 | 3.54e-01 | 100.0% | 37.5% |
| 3509348 | 214.1.1.15 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7063, DUF7145 | 0.58 | 49.0 | 3.11e-01 | 100.0% | 29.3% |
| 3513933 | 214.1.1.9 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7063 | 0.57 | 49.0 | 3.75e-01 | 100.0% | 67.7% |
| 3502260 | 214.1.1.9 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7063 | 0.57 | 48.0 | 3.75e-01 | 100.0% | 70.4% |
| 3516794 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.57 | 47.0 | 3.56e-01 | 100.0% | 37.1% |
| 3784333 | 286.1.1.2 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF | 0.57 | 48.0 | 3.65e-01 | 100.0% | 57.9% |
| 4119293 | 2006.1.1.11 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 | 0.56 | 48.0 | 3.11e-01 | 100.0% | 20.0% |
| 3254199 | 2003.1.5.38 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › SAM_MT | 0.55 | 46.0 | 2.85e-01 | 100.0% | 22.8% |
| 3426205 | 286.1.1.2 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF | 0.55 | 46.0 | 3.42e-01 | 100.0% | 52.3% |
| 5057601 | 2006.1.1.11 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 | 0.52 | 43.0 | 3.12e-01 | 100.0% | 30.6% |
| 4241771 | 2006.1.1.11 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 | 0.51 | 41.0 | 2.80e-01 | 100.0% | 22.1% |
| 3926153 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.51 | 41.0 | 2.99e-01 | 100.0% | 30.3% |
D2
high
residues 107-253