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MH598800.1__AXH71637.1__P031_gp16__00016

Bact-Vir

MH598800.1__AXH71637.1__P031_gp16__00016

Identity

Accession:
MH598800 ↗
Kingdom:
phage

Quality

94.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Pelagivirus› Pelagibacter_phage_HTVC031P

TaxID: 2283017

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-90
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.87 51.0 5.54e-01 100.0% 69.7%
2rm4A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.71 51.0 5.46e-01 100.0% 86.4%
4f7uF00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.70 50.0 5.21e-01 100.0% 79.5%
4emhA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.69 51.0 5.77e-01 100.0% 98.3%
4c92G00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 49.0 5.04e-01 100.0% 78.7%
1qtqA01 2.40.240.10 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P 0.62 35.0 3.21e-01 97.4% 39.3%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 42.0 4.41e-01 100.0% 91.2%
3stjA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.53 33.0 3.26e-01 100.0% 55.3%
1yfsA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.53 40.0 2.90e-01 83.1% 85.0%
1vq8T00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.53 37.0 3.32e-01 100.0% 49.6%
6o5cA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.53 40.0 4.08e-01 100.0% 85.5%
2nysA00 2.30.30.220 Mainly Beta › Roll › SH3 type barrels. › SspB-like 0.53 46.0 4.03e-01 100.0% 64.1%
1p3cA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.52 35.0 3.28e-01 100.0% 53.3%
3pieC05 2.170.260.40 Mainly Beta › Beta Complex › paz domain › 0.51 41.0 3.32e-01 94.8% 92.2%
ECOD (37)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5048425 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 73.0 7.24e-01 100.0% 96.2%
5031673 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 64.0 5.72e-01 100.0% 67.6%
3272363 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.74 54.0 4.98e-01 100.0% 61.1%
4387099 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.73 58.0 5.80e-01 100.0% 80.0%
4340758 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 54.0 5.65e-01 100.0% 85.7%
4425420 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.71 57.0 5.54e-01 100.0% 76.5%
4281699 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 52.0 5.34e-01 100.0% 78.7%
5070306 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 66.0 5.95e-01 100.0% 80.0%
1175040 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.69 51.0 5.77e-01 100.0% 98.3%
3712963 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.69 51.0 4.72e-01 100.0% 62.8%
3518029 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.69 51.0 4.61e-01 100.0% 59.0%
3595291 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 51.0 4.80e-01 100.0% 65.6%
4073433 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 51.0 5.10e-01 100.0% 75.0%
4990442 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.68 50.0 4.97e-01 100.0% 73.8%
4162968 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 52.0 5.16e-01 100.0% 78.5%
409204 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.65 48.0 4.28e-01 100.0% 57.3%
3304887 10.12.1.3 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.64 43.0 3.29e-01 100.0% 29.4%
3293824 10.12.1.3 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.64 43.0 3.10e-01 100.0% 24.7%
3717986 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.61 48.0 4.20e-01 100.0% 56.5%
3595833 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.60 47.0 4.38e-01 100.0% 68.4%
3595169 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 46.0 4.86e-01 100.0% 92.9%
3601070 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 44.0 4.70e-01 98.7% 93.8%
4078162 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 44.0 4.51e-01 100.0% 82.4%
4517901 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 50.0 4.62e-01 100.0% 74.7%
4025080 220.1.1.198 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_FAN 0.56 50.0 3.80e-01 100.0% 62.2%
3999509 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 42.0 4.07e-01 100.0% 71.1%
3636066 4.1.1.179 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6590 0.55 47.0 3.82e-01 100.0% 76.2%
3587555 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 40.0 4.21e-01 100.0% 90.0%
3697717 220.1.1.89 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_4 0.53 44.0 3.57e-01 97.4% 57.6%
3700518 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.53 46.0 3.90e-01 100.0% 58.5%
3640072 12.3.1.2 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Cu_amine_oxid 0.52 40.0 2.58e-01 87.0% 67.5%
3597361 4.23.1.0 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like 0.52 45.0 3.82e-01 100.0% 58.5%
3597372 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.51 41.0 2.86e-01 100.0% 24.2%
3410874 4004.1.1.0 ↗ beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like 0.51 44.0 3.39e-01 100.0% 68.4%
3730266 220.1.1.89 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_4 0.51 43.0 3.38e-01 97.4% 63.6%
4019852 213.1.1.5 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › MOZ_SAS 0.51 42.0 3.31e-01 94.8% 80.6%
3701091 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 42.0 3.42e-01 96.1% 88.7%