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MH598804.1__AXH71454.1__P105_gp51__00051

Bact-Vir

MH598804.1__AXH71454.1__P105_gp51__00051

Identity

Accession:
MH598804 ↗
Kingdom:
phage

Quality

73.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Pelagivirus› Pelagibacter_phage_HTVC105P

TaxID: 2283018

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-39
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pgsA03 1.10.3410.10 Mainly Alpha › Orthogonal Bundle › putative deoxyguanosinetriphosphate triphosphohydrolase fold › putative deoxyguanosinetriphosphate triphosphohydrolase like domain 0.76 60.0 4.39e-01 84.6% 47.4%
3t8vA05 1.25.50.10 Mainly Alpha › Alpha Horseshoe › Zincin-like fold › Peptidase M1, alanyl aminopeptidase, C-terminal domain 0.72 61.0 3.53e-01 97.4% 87.0%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1182335 109.4.1.25 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DIL 0.77 60.0 3.95e-01 87.2% 26.1%
5032433 7014.1.1.2 ↗ alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › TauE 0.65 55.0 3.73e-01 97.4% 59.3%
3209650 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 51.0 2.80e-01 87.2% 39.1%
3736326 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.64 44.0 3.75e-01 74.4% 49.2%
3509575 2003.1.5.42 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_21 0.61 50.0 3.05e-01 97.4% 67.4%