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MH598805.1__AXN54118.1__P109_gp53__00053

Bact-Vir

MH598805.1__AXN54118.1__P109_gp53__00053

Identity

Accession:
MH598805 ↗
Kingdom:
phage

Quality

92.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Pelagivirus› Pelagibacter_phage_HTVC109P

TaxID: 2283019

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 38-163
PDB
Domain cluster: rep: KF905377.1__AHY82786.1__X__00001__D4-107
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01832.26 best Glucosaminidase 61.4 2.00e-16 95.2% 87.0%
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4qdnA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.85 68.0 7.02e-01 97.6% 87.3%
3fi7A01 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.83 71.0 7.03e-01 100.0% 85.4%
4kt3A00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.80 71.0 6.84e-01 100.0% 83.7%
4hjzA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.60 55.0 4.84e-01 100.0% 86.3%
1v07A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.54 38.0 4.05e-01 96.0% 83.6%
2qgsB01 1.10.472.50 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like 0.53 31.0 3.64e-01 90.5% 83.0%
2kvsA00 1.10.150.260 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › YozE SAM-like 0.52 30.0 3.59e-01 96.0% 87.5%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3388213 235.1.1.10 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glucosaminidase 0.91 88.0 7.14e-01 100.0% 86.7%
3980563 235.1.1.10 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glucosaminidase 0.84 81.0 7.36e-01 100.0% 86.8%
3590542 235.1.1.10 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glucosaminidase 0.84 81.0 7.33e-01 100.0% 84.4%
4520768 235.1.1.10 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glucosaminidase 0.83 79.0 7.05e-01 100.0% 79.9%
3989161 235.1.1.10 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glucosaminidase 0.82 68.0 6.05e-01 100.0% 64.1%
3589177 235.1.1.10 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glucosaminidase 0.82 77.0 6.99e-01 100.0% 94.5%
1086527 235.1.1.10 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glucosaminidase 0.80 71.0 6.84e-01 100.0% 83.7%
5029852 235.1.1.0 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.76 69.0 6.26e-01 100.0% 75.0%
5080549 235.1.1.0 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.72 59.0 6.05e-01 92.9% 90.0%
3602034 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 42.0 3.49e-01 80.2% 92.2%
3390973 592.1.1.1 ↗ alpha arrays › PWI domain-like › PWI domain › PWI domain › PWI 0.55 32.0 3.38e-01 96.0% 60.9%
5030521 5060.2.1.1 ↗ alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF 0.52 33.0 3.41e-01 83.3% 64.0%
3731178 3651.1.1.0 ↗ alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain 0.51 28.0 2.96e-01 81.7% 53.9%
3629059 632.2.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains 0.50 26.0 3.09e-01 88.9% 71.8%