Back to structures

MH632120.1__AXN53360.1__PBI_THONKO_90__00090

Bact-Vir

MH632120.1__AXN53360.1__PBI_THONKO_90__00090

Identity

Accession:
MH632120 ↗
Kingdom:
phage

Quality

67.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-63
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ixjA01 3.30.1300.80 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.82 62.0 5.48e-01 80.0% 57.1%
4m70B00 1.10.246.200 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain 0.79 56.0 4.69e-01 74.5% 45.1%
2c42A06 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.73 56.0 3.37e-01 83.6% 15.3%
4didB01 1.20.58.450 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Cell division control protein 42 homolog 0.72 52.0 4.14e-01 78.2% 37.7%
4h63K00 1.10.287.3490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.64 43.0 3.55e-01 100.0% 39.8%
1nmrA01 1.10.1900.10 Mainly Alpha › Orthogonal Bundle › c-terminal domain of poly(a) binding protein › c-terminal domain of poly(a) binding protein 0.62 48.0 4.45e-01 90.9% 90.8%
1j0tA00 1.10.2010.10 Mainly Alpha › Orthogonal Bundle › Crustacean CHH/MIH/GIH neurohormone › Crustacean CHH/MIH/GIH neurohormone 0.61 42.0 3.77e-01 70.9% 50.0%
1hwyA01 1.10.287.140 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.58 41.0 4.29e-01 76.4% 92.2%
4dooA01 3.50.70.10 Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › 0.55 38.0 2.97e-01 78.2% 50.3%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5048048 4957.1.1.9 a+b complex topology › helical domain in yeast RNA-polymerases › third helical domain in yeast RNA-polymerase II beta-prime subunit › third helical domain in yeast RNA-polymerase II beta-prime subunit › HAAS 0.87 63.0 5.62e-01 76.4% 56.0%
3588902 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.84 60.0 4.42e-01 76.4% 30.0%
3583210 5.1.2.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › WD40 0.72 52.0 3.63e-01 76.4% 25.1%
3503648 190.1.1.1 alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box 0.70 46.0 4.54e-01 72.7% 63.3%
3917691 541.1.1.0 alpha duplicates or obligate multimers › Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit › Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit › Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit 0.66 48.0 4.44e-01 98.2% 61.4%