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MH645904.1__AXQ66702.1__X__00077
Bact-VirMH645904.1__AXQ66702.1__X__00077
Identity
- Accession:
- MH645904 ↗
- Kingdom:
- phage
Quality
92.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Demerecviridae›
Pogseptimavirus›
Vibrio_phage_vB_VpS_PG07
TaxID: 2301664
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-56
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 52.0 | 4.66e-01 | 89.6% | 79.4% |
| 4g6tA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.62 | 49.0 | 3.71e-01 | 91.7% | 80.5% |
| 2ct4A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 43.0 | 3.86e-01 | 75.0% | 87.1% |
| 4ry2A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.60 | 50.0 | 3.69e-01 | 97.9% | 42.6% |
| 1vwxA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 47.0 | 4.09e-01 | 93.8% | 92.5% |
| 2k1gA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.59 | 41.0 | 3.14e-01 | 77.1% | 64.3% |
| 6ketA01 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.59 | 47.0 | 2.82e-01 | 89.6% | 23.2% |
| 2yugA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.59 | 40.0 | 2.88e-01 | 72.9% | 71.6% |
| 2hbpA00 | 2.30.30.700 | Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 | 0.58 | 41.0 | 3.75e-01 | 75.0% | 72.7% |
| 2dk3A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 47.0 | 3.93e-01 | 91.7% | 81.4% |
| 6rjiA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 37.0 | 3.68e-01 | 97.9% | 57.7% |
| 3h27A00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.56 | 39.0 | 2.30e-01 | 72.9% | 23.3% |
| 2z3gB00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.56 | 41.0 | 3.09e-01 | 95.8% | 29.9% |
| 7razA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 45.0 | 3.83e-01 | 93.8% | 61.2% |
| 2dl5A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 42.0 | 3.64e-01 | 83.3% | 78.2% |
| 5suvC00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.55 | 42.0 | 3.36e-01 | 95.8% | 93.6% |
| 5xuhA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.55 | 42.0 | 3.35e-01 | 97.9% | 95.2% |
| 4g7nA02 | 3.30.1120.130 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.54 | 39.0 | 3.29e-01 | 100.0% | 41.2% |
| 1fxkC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 44.0 | 3.32e-01 | 100.0% | 46.6% |
| 5ajiB02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 42.0 | 4.17e-01 | 93.8% | 94.0% |
| 4dt4A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.53 | 42.0 | 4.04e-01 | 95.8% | 77.2% |
| 2wdoA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.53 | 40.0 | 3.25e-01 | 97.9% | 91.9% |
| 2zdiC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 44.0 | 3.20e-01 | 100.0% | 42.6% |
| 1s68A02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.53 | 38.0 | 3.07e-01 | 83.3% | 90.3% |
| 1gydB00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 38.0 | 2.46e-01 | 87.5% | 60.0% |
| 1ydyA00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.52 | 37.0 | 2.33e-01 | 77.1% | 15.9% |
| 1obsA02 | 4.10.470.10 | Few Secondary Structures › Irregular › Ricin (A Subunit), domain 2 › Ricin (A Subunit), domain 2 | 0.51 | 43.0 | 3.70e-01 | 100.0% | 86.7% |
| 3d6wB02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.51 | 34.0 | 3.56e-01 | 100.0% | 87.2% |
| 6f0cA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.50 | 42.0 | 2.50e-01 | 95.8% | 96.6% |
| 2uz8A01 | 3.40.30.90 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › | 0.50 | 38.0 | 3.80e-01 | 93.8% | 90.7% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3447770 | 4.1.1.141 ↗ | beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor | 0.74 | 49.0 | 5.50e-01 | 100.0% | 94.3% |
| 3213114 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.69 | 50.0 | 4.04e-01 | 75.0% | 78.9% |
| 2512682 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.64 | 46.0 | 4.42e-01 | 100.0% | 65.5% |
| 1263713 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.59 | 46.0 | 4.52e-01 | 85.4% | 98.1% |
| 2700914 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.59 | 42.0 | 3.58e-01 | 75.0% | 67.5% |
| 5058270 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.59 | 45.0 | 4.25e-01 | 87.5% | 88.3% |
| 3523918 | 4.1.1.99 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_10 | 0.58 | 45.0 | 4.17e-01 | 89.6% | 96.9% |
| 5043091 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.57 | 43.0 | 3.96e-01 | 87.5% | 77.9% |
| 5040230 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.57 | 43.0 | 4.01e-01 | 87.5% | 81.5% |
| 3601162 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 43.0 | 4.00e-01 | 87.5% | 87.7% |
| 4043931 | 2.1.1.9 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e | 0.57 | 37.0 | 3.56e-01 | 100.0% | 51.7% |
| 3222210 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.57 | 47.0 | 4.22e-01 | 95.8% | 97.1% |
| 4964421 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.57 | 45.0 | 4.20e-01 | 93.8% | 80.0% |
| 4056487 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.57 | 45.0 | 4.09e-01 | 93.8% | 74.3% |
| 5050433 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 41.0 | 4.26e-01 | 81.2% | 100.0% |
| 4932588 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.56 | 45.0 | 4.18e-01 | 93.8% | 80.0% |
| 3941962 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.56 | 44.0 | 3.67e-01 | 89.6% | 61.1% |
| 4977469 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.56 | 44.0 | 4.03e-01 | 93.8% | 77.1% |
| 5028692 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.56 | 44.0 | 4.12e-01 | 93.8% | 80.0% |
| 4959192 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.56 | 43.0 | 4.00e-01 | 89.6% | 83.1% |
| 5025204 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.55 | 44.0 | 3.70e-01 | 93.8% | 84.4% |
| 4026678 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.55 | 44.0 | 3.96e-01 | 93.8% | 75.7% |
| 4938120 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.54 | 43.0 | 3.93e-01 | 93.8% | 74.3% |
| 3662319 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.54 | 43.0 | 3.77e-01 | 93.8% | 82.5% |
| 5067372 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.54 | 43.0 | 4.15e-01 | 95.8% | 86.7% |
| 3930643 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 42.0 | 4.01e-01 | 87.5% | 95.0% |
| 4955296 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.54 | 42.0 | 3.96e-01 | 93.8% | 80.0% |
| 4952854 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.54 | 42.0 | 3.93e-01 | 93.8% | 80.0% |
| 4981036 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.54 | 38.0 | 3.89e-01 | 79.2% | 97.8% |
| 3947085 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.54 | 42.0 | 3.84e-01 | 93.8% | 74.3% |
| 2697704 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.53 | 43.0 | 4.00e-01 | 95.8% | 78.5% |
| 3988005 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.53 | 41.0 | 4.08e-01 | 91.7% | 98.0% |
| 4978125 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.53 | 41.0 | 4.26e-01 | 91.7% | 100.0% |
| 4142364 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.53 | 42.0 | 3.88e-01 | 93.8% | 80.0% |
| 3246081 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.52 | 35.0 | 3.50e-01 | 93.8% | 68.0% |
| 1884741 | 4.1.1.130 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_19 | 0.51 | 40.0 | 3.86e-01 | 93.8% | 88.1% |
| 4383749 | 2005.1.1.7 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d | 0.51 | 39.0 | 2.50e-01 | 93.8% | 21.6% |
| 3482683 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 43.0 | 4.00e-01 | 93.8% | 86.7% |
| 3959440 | 4.1.1.180 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3107 | 0.50 | 41.0 | 3.83e-01 | 100.0% | 90.8% |
D2
medium
residues 59-119
Domain cluster:
rep: MK448748.1__QBX17976.1__Javan389_0017__00017__D13-80
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u3eM01 | 3.90.75.20 | Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › | 0.82 | 68.0 | 5.61e-01 | 95.1% | 51.9% |
| 6ruiB04 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.59 | 48.0 | 3.61e-01 | 98.4% | 86.8% |
| 7ob9B01 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.59 | 48.0 | 3.53e-01 | 98.4% | 80.2% |
| 3le4A00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.57 | 33.0 | 3.42e-01 | 70.5% | 60.0% |
| 4qiwB04 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.57 | 46.0 | 3.57e-01 | 96.7% | 87.7% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.56 | 40.0 | 4.18e-01 | 80.3% | 82.5% |
| 6gfaA02 | 3.30.30.30 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.56 | 39.0 | 4.08e-01 | 73.8% | 89.3% |
| 3d2fA02 | 3.30.30.30 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.54 | 43.0 | 4.03e-01 | 88.5% | 100.0% |
| 2a6hC05 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.53 | 38.0 | 3.62e-01 | 78.7% | 76.0% |
| 4innA00 | 2.40.128.520 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 42.0 | 3.34e-01 | 93.4% | 61.0% |
| 3f0zA01 | 3.30.310.260 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.53 | 38.0 | 3.24e-01 | 78.7% | 77.7% |
| 1pwaA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.52 | 40.0 | 3.35e-01 | 90.2% | 76.4% |
| 4tvcA01 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.52 | 44.0 | 3.18e-01 | 96.7% | 54.3% |
| 3dsoA00 | 2.40.10.300 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Copper resistance protein K | 0.52 | 43.0 | 4.22e-01 | 100.0% | 87.9% |
| 2gu3A02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 36.0 | 3.58e-01 | 93.4% | 74.6% |
| 3mx7A00 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 39.0 | 3.56e-01 | 90.2% | 96.7% |
| 1kaxA02 | 3.30.30.30 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.50 | 35.0 | 3.61e-01 | 73.8% | 89.1% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3926624 | 4184.1.1.0 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat | 0.66 | 41.0 | 4.45e-01 | 91.8% | 78.0% |
| 3995638 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.65 | 47.0 | 3.72e-01 | 78.7% | 64.6% |
| 5037381 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.55 | 35.0 | 3.81e-01 | 70.5% | 78.0% |
| 3506773 | 214.1.1.9 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7063 | 0.54 | 44.0 | 3.61e-01 | 93.4% | 62.5% |
| 3729086 | 5.1.3.39 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › TrAA12 | 0.54 | 44.0 | 2.73e-01 | 95.1% | 97.2% |
| 5081581 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.54 | 45.0 | 3.09e-01 | 95.1% | 40.0% |
| 3227340 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.53 | 42.0 | 3.30e-01 | 91.8% | 50.0% |
| 4123857 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.53 | 33.0 | 3.89e-01 | 96.7% | 97.5% |
| 3509371 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.52 | 41.0 | 3.47e-01 | 91.8% | 72.2% |
| 3912111 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.52 | 42.0 | 3.54e-01 | 93.4% | 67.0% |
| 3307718 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.52 | 35.0 | 2.90e-01 | 70.5% | 67.5% |
| 3422058 | 5.1.3.144 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like | 0.52 | 42.0 | 2.88e-01 | 95.1% | 41.5% |
| 5069121 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.51 | 34.0 | 3.44e-01 | 91.8% | 70.0% |
| 3511200 | 389.1.2.0 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain | 0.51 | 38.0 | 3.50e-01 | 83.6% | 89.4% |
| 3487868 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.50 | 34.0 | 3.37e-01 | 70.5% | 83.1% |
D3
medium
residues 120-172
Domain cluster:
rep: OP172756.1__WAX11484.1__CB473P2_00064__00064__D2-63
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13392.13 best | HNH_3 | 28.2 | 1.50e-06 | 66.0% | 67.4% |
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1a73A00 | 3.90.75.10 | Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › Homing Intron 3 (I-ppo) Encoded Endonuclease; Chain A | 0.74 | 66.0 | 4.64e-01 | 100.0% | 42.0% |
| 3m7kA00 | 3.30.40.220 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.65 | 52.0 | 3.93e-01 | 94.3% | 65.5% |
| 2gmlA01 | 3.30.70.580 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, N-terminal subdomain | 0.63 | 46.0 | 3.83e-01 | 98.1% | 43.0% |
| 5zhhA02 | 3.40.190.80 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › | 0.62 | 48.0 | 3.80e-01 | 88.7% | 41.5% |
| 2bjiB02 | 3.40.190.80 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › | 0.61 | 47.0 | 3.67e-01 | 88.7% | 37.7% |
| 1g0hA02 | 3.40.190.80 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › | 0.61 | 47.0 | 3.76e-01 | 88.7% | 47.0% |
| 2oarB00 | 1.10.1200.120 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Large-conductance mechanosensitive channel, MscL; domain 1 | 0.59 | 31.0 | 2.35e-01 | 81.1% | 21.6% |
| 1jp4A02 | 3.40.190.80 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › | 0.56 | 44.0 | 3.47e-01 | 92.5% | 45.7% |
| 6todA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.56 | 40.0 | 2.52e-01 | 77.4% | 31.2% |
| 3fkdA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 39.0 | 3.18e-01 | 81.1% | 82.1% |
| 2yk0A03 | 1.20.58.1930 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 38.0 | 2.52e-01 | 75.5% | 65.2% |
| 2od0A00 | 3.30.1460.30 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › YgaC/TfoX-N like chaperone | 0.53 | 38.0 | 3.09e-01 | 98.1% | 38.8% |
| 6rzqA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.53 | 36.0 | 3.24e-01 | 73.6% | 62.4% |
| 4bpxD00 | 1.20.930.80 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › | 0.53 | 37.0 | 2.54e-01 | 77.4% | 26.8% |
| 2wnsA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 47.0 | 3.13e-01 | 100.0% | 70.1% |
| 5zynB01 | 3.90.700.10 | Alpha Beta › Alpha-Beta Complex › Flavocytochrome C3; Chain A, domain 1 › Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 0.52 | 41.0 | 3.12e-01 | 96.2% | 68.4% |
| 2jzxA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.52 | 37.0 | 3.28e-01 | 77.4% | 93.7% |
| 1p50A02 | 3.30.590.10 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain | 0.51 | 42.0 | 2.79e-01 | 98.1% | 90.0% |
| 2rdpA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 32.0 | 2.48e-01 | 96.2% | 23.6% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3586841 | 378.1.1.7 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NUMOD4,HNH_3 | 0.85 | 74.0 | 5.69e-01 | 98.1% | 44.3% |
| 3695527 | 378.1.1.6 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › zf-His_Me_endon | 0.80 | 70.0 | 5.36e-01 | 98.1% | 57.5% |
| 5053631 | 378.1.1.19 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_3 | 0.75 | 65.0 | 5.11e-01 | 96.2% | 63.6% |
| 4949181 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.70 | 59.0 | 5.32e-01 | 98.1% | 78.7% |
| 4303143 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.66 | 56.0 | 4.93e-01 | 100.0% | 67.1% |
| 4267068 | 7587.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases | 0.66 | 54.0 | 4.19e-01 | 92.5% | 41.7% |
| 3952325 | 7587.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Inositol_P | 0.63 | 50.0 | 3.83e-01 | 90.6% | 38.5% |
| 4623807 | 7587.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Inositol_P | 0.63 | 49.0 | 3.87e-01 | 90.6% | 40.0% |
| 3166072 | 7587.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Inositol_P | 0.62 | 49.0 | 3.87e-01 | 90.6% | 41.7% |
| 3266087 | 7587.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Inositol_P | 0.62 | 48.0 | 3.75e-01 | 88.7% | 38.4% |
| 3246281 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.62 | 47.0 | 4.41e-01 | 83.0% | 98.5% |
| 3661512 | 7587.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Inositol_P | 0.62 | 48.0 | 3.64e-01 | 90.6% | 35.7% |
| 3170758 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.61 | 51.0 | 4.25e-01 | 96.2% | 75.8% |
| 3759122 | 386.1.1.213 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_13 | 0.60 | 49.0 | 3.48e-01 | 94.3% | 45.0% |
| 4370301 | 7587.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Inositol_P | 0.60 | 46.0 | 3.71e-01 | 90.6% | 41.7% |
| 5078665 | 7587.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases | 0.60 | 46.0 | 3.59e-01 | 90.6% | 40.7% |
| 385851 | 7587.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Inositol_P | 0.60 | 46.0 | 3.59e-01 | 90.6% | 37.9% |
| 4446838 | 7587.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Inositol_P | 0.59 | 47.0 | 3.77e-01 | 94.3% | 45.4% |
| 3495918 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.58 | 44.0 | 3.74e-01 | 86.8% | 60.0% |
| 3498872 | 7587.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Inositol_P | 0.57 | 43.0 | 3.88e-01 | 90.6% | 75.3% |
| 5011141 | 7587.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases | 0.57 | 43.0 | 3.53e-01 | 90.6% | 46.7% |
| 5046118 | 7587.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Inositol_P | 0.57 | 44.0 | 3.48e-01 | 90.6% | 44.8% |
| 3498749 | 7587.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Inositol_P | 0.57 | 43.0 | 3.41e-01 | 90.6% | 46.9% |
| 4438406 | 7587.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Inositol_P | 0.56 | 43.0 | 3.40e-01 | 90.6% | 43.1% |
| 4998735 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 45.0 | 3.55e-01 | 100.0% | 94.1% |
| 3880741 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.54 | 34.0 | 3.39e-01 | 73.6% | 60.0% |
| 4955418 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 41.0 | 3.00e-01 | 100.0% | 86.9% |