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MH651167.1__AXQ62892.1__SEA_ANGELIQUE_61__00061
Bact-VirMH651167.1__AXQ62892.1__SEA_ANGELIQUE_61__00061
Identity
- Accession:
- MH651167 ↗
- Kingdom:
- phage
Quality
89.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-64
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1nijA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.74 | 57.0 | 3.91e-01 | 84.7% | 24.4% |
| 1kqfB01 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 46.0 | 4.10e-01 | 81.4% | 80.0% |
| 5eb9A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 45.0 | 3.71e-01 | 96.6% | 42.0% |
| 4g59C02 | 3.30.500.30 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.61 | 49.0 | 3.77e-01 | 96.6% | 94.9% |
| 3p86A02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.61 | 43.0 | 3.12e-01 | 74.6% | 50.0% |
| 2hqbA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 44.0 | 3.36e-01 | 81.4% | 96.7% |
| 3f61A02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.59 | 41.0 | 3.02e-01 | 74.6% | 49.1% |
| 1hxmB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 44.0 | 3.53e-01 | 91.5% | 39.2% |
| 2mm0A00 | 2.10.70.110 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.58 | 40.0 | 3.97e-01 | 89.8% | 68.8% |
| 2freA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.58 | 45.0 | 3.25e-01 | 89.8% | 62.8% |
| 3m4aA03 | 3.90.15.10 | Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 | 0.58 | 40.0 | 3.27e-01 | 74.6% | 68.6% |
| 4itjB02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.55 | 40.0 | 2.87e-01 | 79.7% | 63.3% |
| 3ztvA01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.54 | 41.0 | 2.61e-01 | 84.7% | 33.0% |
| 1phkA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.52 | 39.0 | 2.90e-01 | 86.4% | 46.2% |
| 2kgfA00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.52 | 43.0 | 3.38e-01 | 98.3% | 86.4% |
| 4ijrA00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.51 | 42.0 | 2.72e-01 | 98.3% | 85.4% |
| 2j58A03 | 3.30.1950.10 | Alpha Beta › 2-Layer Sandwich › wza like fold › wza like domain | 0.50 | 36.0 | 3.33e-01 | 86.4% | 58.0% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5032556 | 2008.1.1.5 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NucS_C | 0.65 | 49.0 | 4.63e-01 | 84.7% | 88.0% |
| 4943984 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.63 | 52.0 | 3.74e-01 | 96.6% | 88.6% |
| 5366 | 304.48.1.15 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RdRP_3 | 0.61 | 50.0 | 3.05e-01 | 91.5% | 40.7% |
| 5001324 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 45.0 | 3.73e-01 | 78.0% | 79.0% |
| 5000800 | 245.1.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C | 0.59 | 47.0 | 4.34e-01 | 93.2% | 92.8% |
| 5060684 | 3268.1.1.1 ↗ | a+b two layers › N-terminal domain in xanthine dehydrogenase › N-terminal domain in xanthine dehydrogenase › N-terminal domain in xanthine dehydrogenase › XdhC_CoxI | 0.59 | 49.0 | 4.12e-01 | 100.0% | 96.4% |
| 4983083 | 3268.1.1.1 ↗ | a+b two layers › N-terminal domain in xanthine dehydrogenase › N-terminal domain in xanthine dehydrogenase › N-terminal domain in xanthine dehydrogenase › XdhC_CoxI | 0.58 | 49.0 | 4.16e-01 | 100.0% | 92.4% |
| 3958223 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.58 | 45.0 | 3.98e-01 | 89.8% | 89.5% |
| 5060130 | 3268.1.1.1 ↗ | a+b two layers › N-terminal domain in xanthine dehydrogenase › N-terminal domain in xanthine dehydrogenase › N-terminal domain in xanthine dehydrogenase › XdhC_CoxI | 0.58 | 47.0 | 4.04e-01 | 100.0% | 97.3% |
| 147056 | 3268.1.1.1 ↗ | a+b two layers › N-terminal domain in xanthine dehydrogenase › N-terminal domain in xanthine dehydrogenase › N-terminal domain in xanthine dehydrogenase › XdhC_CoxI | 0.58 | 47.0 | 4.21e-01 | 100.0% | 91.5% |
| 3589383 | 885.1.1.1 ↗ | a+b complex topology › Transcription factor NusA, N-terminal domain › Transcription factor NusA, N-terminal domain › Transcription factor NusA, N-terminal domain › NusA_N | 0.57 | 47.0 | 3.82e-01 | 96.6% | 78.4% |
| 5012958 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.56 | 44.0 | 3.48e-01 | 88.1% | 56.2% |
| 3841474 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.56 | 42.0 | 2.73e-01 | 83.1% | 47.5% |
| 3826256 | 101.1.2.303 ↗ | alpha arrays › HTH › HTH › winged helix domain › RPC5 | 0.56 | 43.0 | 3.76e-01 | 84.7% | 65.6% |
| 3957844 | 375.1.1.49 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RbpA | 0.56 | 33.0 | 3.22e-01 | 79.7% | 52.3% |
| 3251564 | 2002.1.1.234 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Meth_synt_2+Meth_synt_1 | 0.54 | 41.0 | 2.51e-01 | 84.7% | 51.4% |
| 4093535 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.53 | 39.0 | 3.25e-01 | 86.4% | 82.3% |
| 3284427 | 1031.1.1.1 ↗ | a+b complex topology › Rifampin phosphotransferase RPH-Lm middle domain › Rifampin phosphotransferase RPH-Lm middle domain › Rifampin phosphotransferase RPH-Lm middle domain › Rph_4th | 0.53 | 44.0 | 2.76e-01 | 100.0% | 94.2% |
| 5062418 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.52 | 42.0 | 2.87e-01 | 89.8% | 58.7% |
| 4956135 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.52 | 35.0 | 3.53e-01 | 72.9% | 70.0% |
| 2462273 | 2.2.1.2 ↗ | beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › Enterotoxin_b | 0.52 | 36.0 | 2.87e-01 | 74.6% | 58.5% |
| 3598873 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.51 | 43.0 | 3.59e-01 | 100.0% | 87.7% |
| 3993275 | 109.2.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Prenyltrans | 0.51 | 45.0 | 2.82e-01 | 100.0% | 42.9% |
| 3912274 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.51 | 35.0 | 3.40e-01 | 74.6% | 85.7% |
| 3614367 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.50 | 42.0 | 2.99e-01 | 100.0% | 94.1% |
| 1162187 | 233.1.1.8 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › M157_N_1 | 0.50 | 40.0 | 2.99e-01 | 96.6% | 35.0% |