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MH669006.1AXQ61303.1SEA_LIBERTYBELL_62__00062

Bact-Vir

MH669006.1__AXQ61303.1__SEA_LIBERTYBELL_62__00062

Identity

Accession:: MH669006 ↗
Kingdom:: phage

Quality

87.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Streptomyces_phage_LibertyBell

TaxID: 2301574

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 35-96

PDB

Domain cluster: representative

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2nsfA01	1.20.120.450	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain	0.60	49.0	3.73e-01	93.5%	61.6%
1l1lA01	3.20.70.20	Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain ›	0.59	50.0	2.96e-01	98.4%	65.8%
2elcA01	1.20.970.10	Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C	0.59	41.0	4.02e-01	75.8%	68.7%
6k4yI00	1.10.1810.10	Mainly Alpha › Orthogonal Bundle › Anti-sigma factor AsiA › Anti-Sigma Factor A	0.57	40.0	3.58e-01	74.2%	79.5%
3zhiA00	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.56	39.0	3.75e-01	74.2%	97.3%
1t6sB02	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.56	35.0	3.30e-01	74.2%	49.4%
3k8uA01	3.90.70.10	Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases	0.56	47.0	3.80e-01	100.0%	86.3%
3ocjA00	3.40.50.150	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39	0.55	39.0	2.60e-01	77.4%	74.0%
2v6zM00	1.10.8.60	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.51	37.0	3.61e-01	82.3%	78.7%
2zt5A02	3.30.40.230	Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 ›	0.51	38.0	3.60e-01	88.7%	69.0%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3788556	190.1.1.0 ↗	alpha arrays › HMG-box-like › HMG-box › HMG-box	0.75	60.0	4.93e-01	88.7%	75.7%
5055984	219.1.1.0 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases	0.63	50.0	4.01e-01	90.3%	83.0%
3592580	190.1.1.0 ↗	alpha arrays › HMG-box-like › HMG-box › HMG-box	0.63	47.0	4.84e-01	85.5%	85.0%
3166324	148.1.3.334 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF27180	0.63	51.0	4.19e-01	93.5%	53.3%
3246016	2484.1.1.205 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27035	0.58	45.0	3.38e-01	87.1%	31.8%
3961124	3281.1.1.1 ↗	alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M	0.58	39.0	2.65e-01	71.0%	48.2%
3703785	541.1.1.0 ↗	alpha duplicates or obligate multimers › Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit › Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit › Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit	0.57	44.0	4.47e-01	87.1%	88.3%
3514747	213.1.1.36 ↗	a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_17	0.55	40.0	3.15e-01	82.3%	48.7%
3784214	101.1.2.251 ↗	alpha arrays › HTH › HTH › winged helix domain › DUF6581	0.54	37.0	3.35e-01	72.6%	52.2%
4345919	148.1.3.49 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Hda_lid	0.53	39.0	3.66e-01	82.3%	65.0%
3481623	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.51	38.0	3.20e-01	80.6%	90.9%