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MH669010.1__AXQ61749.1__SEA_PHAPPINESS_12__00013
Bact-VirMH669010.1__AXQ61749.1__SEA_PHAPPINESS_12__00013
Identity
- Accession:
- MH669010 ↗
- Kingdom:
- phage
Quality
79.0
mean pLDDT
Taxonomy
TaxID: 2301568
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-74
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1oj5A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.63 | 38.0 | 3.15e-01 | 70.2% | 32.4% |
| 2m0rA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.63 | 44.0 | 3.62e-01 | 73.7% | 76.9% |
| 2fgyA01 | 1.20.120.1310 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Carboxysome Shell Carbonic Anhydrase, N-terminal helical domain | 0.58 | 42.0 | 3.38e-01 | 75.4% | 65.4% |
| 2yptA02 | 3.30.2010.10 | Alpha Beta › 2-Layer Sandwich › Zincin-like › "Metalloproteases (""zincins""), catalytic domain" | 0.52 | 39.0 | 3.52e-01 | 82.5% | 90.1% |
| 4inaA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.50 | 39.0 | 2.82e-01 | 91.2% | 29.4% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1240484 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.60 | 41.0 | 2.58e-01 | 73.7% | 95.0% |
| 4287898 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.56 | 45.0 | 3.53e-01 | 89.5% | 77.6% |
| 3587728 | 162.1.1.0 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD | 0.55 | 40.0 | 3.22e-01 | 80.7% | 36.0% |
| 5049823 | 5051.1.1.2 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease | 0.55 | 45.0 | 2.76e-01 | 100.0% | 66.4% |
| 4934780 | 2003.1.1.39 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Sacchrp_dh_NADP | 0.54 | 45.0 | 2.81e-01 | 96.5% | 47.9% |
| 3957903 | 5051.1.1.0 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like | 0.54 | 44.0 | 2.88e-01 | 100.0% | 75.4% |
| 4223092 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.51 | 39.0 | 2.97e-01 | 86.0% | 74.8% |