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MH669012.1__AXQ62008.1__SEA_QUICKMATH_79__00079

Bact-Vir

MH669012.1__AXQ62008.1__SEA_QUICKMATH_79__00079

Identity

Accession:
MH669012 ↗
Kingdom:
phage

Quality

79.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Cheoctovirus› Mycobacterium_phage_QuickMath

TaxID: 2301570

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-72
PDB
Domain cluster: representative
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3e1sA04 2.30.30.940 Mainly Beta › Roll › SH3 type barrels. › 0.64 54.0 5.44e-01 95.6% 91.3%
2p1gA02 2.30.260.10 Mainly Beta › Roll › putative xylanase like fold › putative xylanase like domain 0.64 56.0 4.99e-01 100.0% 75.0%
4fdyA02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.63 52.0 4.21e-01 97.1% 47.0%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 44.0 4.72e-01 83.8% 91.5%
2vobB02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.60 50.0 3.66e-01 100.0% 40.7%
4osnA00 2.30.29.100 Mainly Beta › Roll › PH-domain like › 0.59 46.0 3.95e-01 85.3% 99.1%
2byoA00 2.50.20.20 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.58 48.0 3.63e-01 97.1% 89.6%
2da0A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 46.0 3.99e-01 92.6% 73.7%
4gzuA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 45.0 3.60e-01 89.7% 80.0%
1ntyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 45.0 3.78e-01 89.7% 74.2%
1x1fA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 44.0 3.49e-01 88.2% 57.0%
2a22B00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.56 38.0 2.79e-01 70.6% 95.1%
1r77A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 43.0 3.85e-01 85.3% 100.0%
3buuB00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.56 46.0 3.30e-01 95.6% 76.4%
2gfgA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.55 43.0 3.23e-01 88.2% 46.6%
5agvA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.55 40.0 3.32e-01 77.9% 94.4%
1dynA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 43.0 3.72e-01 89.7% 88.5%
1qhuA01 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.55 43.0 3.18e-01 86.8% 95.6%
3a9gA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.54 46.0 2.96e-01 95.6% 90.8%
2wdtC02 3.30.1490.420 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 2 0.54 47.0 4.17e-01 100.0% 89.1%
5z5dA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 46.0 3.39e-01 100.0% 72.9%
1v89A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 42.0 3.64e-01 89.7% 80.5%
7z6eA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 43.0 3.60e-01 89.7% 84.4%
4gouA02 2.30.29.200 Mainly Beta › Roll › PH-domain like › 0.54 42.0 3.34e-01 89.7% 63.3%
2kuqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 40.0 3.17e-01 82.4% 49.7%
2yzyA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.54 45.0 3.51e-01 98.5% 84.0%
3voqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 43.0 3.69e-01 92.6% 81.9%
4nswA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 42.0 3.69e-01 89.7% 78.0%
3hl6A01 3.30.1300.50 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Putative mobile pathogenicity island, N-terminal domain 0.53 39.0 3.85e-01 80.9% 75.7%
2elbA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 42.0 3.79e-01 91.2% 80.4%
1cidA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 47.0 4.07e-01 100.0% 72.6%
4p9iA00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.53 43.0 3.43e-01 97.1% 86.5%
3sh4A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 43.0 3.19e-01 92.6% 72.3%
2fblB00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.53 41.0 3.30e-01 88.2% 43.9%
2z15A00 3.90.640.90 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › Anti-proliferative protein, N-terminal domain 0.52 37.0 3.17e-01 77.9% 88.2%
1fblA02 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.51 41.0 3.06e-01 91.2% 81.2%
5xnrA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 44.0 3.07e-01 100.0% 51.2%
3kvpA00 6.20.140.10 Special › Other non-globular › Immunoglobulin-like › 0.51 31.0 3.53e-01 70.6% 95.3%
4b8eB00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.50 41.0 3.11e-01 97.1% 66.7%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.50 40.0 3.17e-01 89.7% 44.2%
1y4wA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.50 42.0 3.29e-01 98.5% 82.7%
2z0qA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 39.0 3.24e-01 86.8% 82.0%
ECOD (38)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4966534 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 52.0 5.89e-01 92.6% 100.0%
3653322 4113.1.1.1 ↗ beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 0.72 60.0 4.20e-01 92.6% 74.5%
3419491 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 56.0 5.92e-01 97.1% 100.0%
3820066 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 55.0 5.79e-01 94.1% 98.3%
3348456 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.68 55.0 5.78e-01 95.6% 100.0%
3885050 4.1.1.360 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.67 53.0 3.88e-01 94.1% 33.1%
3774821 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 53.0 5.57e-01 95.6% 98.3%
4023868 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.65 50.0 3.86e-01 92.6% 36.8%
3339162 4.1.1.330 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O 0.64 56.0 4.50e-01 97.1% 56.9%
3929758 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 48.0 5.22e-01 85.3% 100.0%
3476178 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 55.0 4.56e-01 98.5% 93.3%
3482225 4.1.1.300 ↗ beta barrels › SH3 › SH3 › SH3 › KN17_SH3, SH3_KIN17_C 0.61 54.0 4.36e-01 98.5% 88.5%
3536490 220.1.1.7 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS 0.60 46.0 3.94e-01 89.7% 68.8%
147045 3257.1.1.1 ↗ a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.59 45.0 3.39e-01 89.7% 31.7%
3762030 219.1.1.14 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Josephin 0.59 50.0 4.22e-01 100.0% 60.0%
5036498 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.58 44.0 4.33e-01 98.5% 78.7%
4928214 220.1.1.87 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 0.57 45.0 3.70e-01 89.7% 78.4%
3243256 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 48.0 3.56e-01 94.1% 40.0%
3782224 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 45.0 3.39e-01 91.2% 48.9%
3934156 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 42.0 3.63e-01 85.3% 81.7%
3248729 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.55 44.0 3.55e-01 89.7% 61.4%
3478828 220.1.1.28 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › hSac2 0.55 42.0 3.29e-01 88.2% 71.7%
3475430 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 43.0 3.39e-01 89.7% 63.7%
3995797 220.1.1.160 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_MADD 0.55 41.0 4.24e-01 83.8% 87.7%
3257454 220.1.1.12 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Myosin_TH1 0.55 42.0 3.15e-01 89.7% 42.9%
4986209 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 43.0 3.63e-01 89.7% 73.4%
3933763 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 43.0 4.23e-01 89.7% 96.0%
3725687 220.1.1.26 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Vps36_ESCRT-II 0.54 42.0 3.54e-01 89.7% 66.2%
3698882 633.23.1.23 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › Amastin 0.54 41.0 3.11e-01 88.2% 69.7%
3280955 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.54 41.0 2.96e-01 86.8% 48.4%
3890410 11.2.1.29 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF4550 0.53 46.0 3.57e-01 100.0% 56.9%
3258581 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 41.0 2.69e-01 85.3% 28.2%
145656 10.1.1.1 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_1 0.53 43.0 3.19e-01 92.6% 72.3%
3878495 633.23.1.1 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.53 42.0 3.00e-01 88.2% 68.4%
4002730 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.53 42.0 3.11e-01 91.2% 74.0%
3998597 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.52 41.0 3.10e-01 89.7% 74.1%
3737483 220.1.1.70 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_5 0.52 40.0 3.12e-01 89.7% 68.2%
1177249 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.51 39.0 3.36e-01 85.3% 76.3%