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MH673671.2__AYJ74677.1__phiKo_02__00025
Bact-VirMH673671.2__AYJ74677.1__phiKo_02__00025
Identity
- Accession:
- MH673671 ↗
- Kingdom:
- phage
Quality
92.9
mean pLDDT
Taxonomy
TaxID: 2301535
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-85
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xc8A00 | 2.60.40.2980 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.69 | 61.0 | 5.43e-01 | 98.8% | 99.2% |
| 3b5qA00 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.62 | 42.0 | 2.62e-01 | 70.2% | 88.4% |
| 1fr3A00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.61 | 32.0 | 3.53e-01 | 84.5% | 62.7% |
| 1g29102 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 28.0 | 3.60e-01 | 83.3% | 88.9% |
| 2ea9A01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 45.0 | 4.42e-01 | 95.2% | 87.2% |
| 6r3wA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 45.0 | 3.71e-01 | 94.0% | 85.7% |
| 3n8hA02 | 3.30.1300.10 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain | 0.53 | 38.0 | 3.94e-01 | 75.0% | 92.1% |
| 3ossC00 | 2.30.30.830 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 36.0 | 3.93e-01 | 88.1% | 96.9% |
| 3lm2A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 39.0 | 3.78e-01 | 83.3% | 93.8% |
| 2yyzA02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.51 | 30.0 | 3.55e-01 | 85.7% | 86.2% |
| 3jbtA05 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 43.0 | 2.93e-01 | 97.6% | 88.1% |
| 5llwA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 41.0 | 4.08e-01 | 92.9% | 87.0% |
| 1igqB00 | 2.30.30.150 | Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain | 0.50 | 28.0 | 3.23e-01 | 89.3% | 77.2% |
| 4ci8A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 43.0 | 3.01e-01 | 100.0% | 90.1% |
| 2rajA02 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.50 | 39.0 | 3.52e-01 | 88.1% | 77.0% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3928962 | 4161.1.1.2 ↗ | beta complex topology › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC_N | 0.63 | 52.0 | 4.32e-01 | 90.5% | 86.7% |
| 5079258 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.60 | 33.0 | 4.26e-01 | 85.7% | 100.0% |
| 3948516 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.60 | 33.0 | 3.64e-01 | 79.8% | 67.7% |
| 3317544 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.58 | 31.0 | 3.49e-01 | 79.8% | 64.6% |
| 4032291 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.57 | 31.0 | 3.41e-01 | 79.8% | 64.6% |
| 5024985 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.56 | 29.0 | 3.13e-01 | 90.5% | 55.7% |
| 4425795 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.56 | 30.0 | 3.35e-01 | 79.8% | 64.6% |
| 3347231 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.56 | 41.0 | 3.61e-01 | 78.6% | 62.3% |
| 4964178 | 319.1.1.29 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › DUF7127 | 0.55 | 34.0 | 3.69e-01 | 95.2% | 72.6% |
| 3494671 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 27.0 | 3.42e-01 | 86.9% | 82.2% |
| 4188283 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.54 | 39.0 | 4.06e-01 | 88.1% | 80.0% |
| 4975151 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 28.0 | 3.27e-01 | 77.4% | 70.9% |
| None | — | 0.54 | 45.0 | 2.92e-01 | 92.9% | 23.2% | |
| 4018397 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 41.0 | 2.63e-01 | 79.8% | 28.9% |
| 5020790 | 4100.1.1.0 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like | 0.54 | 34.0 | 4.07e-01 | 83.3% | 98.2% |
| 3384553 | 4320.1.1.0 ↗ | alpha superhelices › Taf5 N-terminal domain-like › Taf5 N-terminal domain-like › Taf5 N-terminal domain-like | 0.54 | 41.0 | 2.56e-01 | 84.5% | 55.4% |
| 3888391 | 5.1.4.325 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF30552 | 0.54 | 46.0 | 3.15e-01 | 100.0% | 82.0% |
| 3829614 | 5.1.4.62 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN | 0.54 | 44.0 | 2.89e-01 | 92.9% | 22.6% |
| 4475796 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 29.0 | 3.47e-01 | 85.7% | 81.8% |
| 4028641 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 45.0 | 2.73e-01 | 100.0% | 45.8% |
| 4261008 | 220.1.1.290 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_5 | 0.53 | 37.0 | 3.51e-01 | 73.8% | 100.0% |
| 3726652 | 5.1.4.62 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN | 0.53 | 42.0 | 2.84e-01 | 90.5% | 36.3% |
| 4991691 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.52 | 45.0 | 3.32e-01 | 98.8% | 84.3% |
| 3421076 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.51 | 45.0 | 3.06e-01 | 96.4% | 80.0% |
| 3546533 | 5.1.4.269 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, HELP, Beta-prop_EML | 0.51 | 43.0 | 2.93e-01 | 100.0% | 84.7% |
| 4031020 | 12.3.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim | 0.51 | 38.0 | 2.67e-01 | 84.5% | 95.2% |
| 4388054 | 4087.1.1.1 ↗ | beta barrels › NifT/FixU › NifT/FixU › NifT/FixU › NifT | 0.50 | 37.0 | 3.99e-01 | 85.7% | 94.3% |
| 3228567 | 2484.1.1.162 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › F-box | 0.50 | 41.0 | 3.56e-01 | 92.9% | 55.7% |
| 3616618 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 43.0 | 2.89e-01 | 97.6% | 93.6% |
| 4025894 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.50 | 36.0 | 3.29e-01 | 75.0% | 71.6% |