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MH673673.1__AYJ73897.1__phiLo_45__00045
Bact-VirMH673673.1__AYJ73897.1__phiLo_45__00045
Identity
- Accession:
- MH673673 ↗
- Kingdom:
- phage
Quality
87.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-192
Domain cluster:
rep: P0_An_pond3_S8_170907_scaffold_156969_prodigal-single.1__X__X__00349__D7-48_56-209
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06067.17 best | DUF932 | 44.9 | 1.80e-11 | 66.0% | 47.6% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3obqA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.60 | 42.0 | 4.73e-01 | 87.2% | 94.3% |
| 2jobA00 | 3.30.160.320 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.60 | 24.0 | 3.20e-01 | 79.8% | 65.7% |
| 2hv2A01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 28.0 | 3.78e-01 | 79.8% | 98.9% |
| 1g1bA00 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.52 | 30.0 | 3.25e-01 | 97.9% | 63.4% |
| 3htyA00 | 2.40.128.280 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 24.0 | 3.31e-01 | 79.8% | 88.3% |
| 1b78A00 | 3.90.950.10 | Alpha Beta › Alpha-Beta Complex › Maf protein › | 0.51 | 31.0 | 3.14e-01 | 100.0% | 60.3% |
| 2vckA00 | 3.40.1500.20 | Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › | 0.51 | 39.0 | 3.82e-01 | 80.9% | 77.9% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3415714 | 79.1.1.23 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Chitin_bind_4 | 0.69 | 29.0 | 4.61e-01 | 87.2% | 100.0% |
| 3408388 | 4.1.1.326 ↗ | beta barrels › SH3 › SH3 › SH3 › Chitin_bind_4 | 0.69 | 30.0 | 4.63e-01 | 88.3% | 98.8% |
| 3400513 | 77.1.1.4 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Chitin_bind_4 | 0.68 | 30.0 | 4.57e-01 | 87.8% | 100.0% |
| 3228525 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.67 | 40.0 | 5.10e-01 | 78.7% | 100.0% |
| 3270992 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.59 | 41.0 | 4.66e-01 | 86.7% | 93.6% |
| 3913149 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.59 | 42.0 | 4.67e-01 | 86.7% | 91.3% |
| 3625971 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.57 | 42.0 | 4.67e-01 | 88.3% | 96.6% |
| 3609745 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.56 | 37.0 | 4.40e-01 | 100.0% | 97.6% |
| 3706175 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.56 | 35.0 | 4.21e-01 | 83.5% | 95.8% |
| 4466411 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.55 | 41.0 | 4.28e-01 | 90.4% | 82.3% |
| 3203571 | 9.13.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3237 | 0.55 | 30.0 | 3.45e-01 | 88.3% | 70.0% |
| 4545659 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.53 | 22.0 | 3.45e-01 | 80.3% | 96.0% |
| 5047426 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.51 | 31.0 | 3.91e-01 | 90.4% | 98.3% |
| 3273105 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.51 | 26.0 | 3.38e-01 | 82.4% | 85.7% |
| 5047928 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.51 | 31.0 | 3.85e-01 | 91.0% | 95.8% |
| 3711119 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.51 | 31.0 | 3.77e-01 | 89.9% | 96.5% |
D2
high
residues 199-312
Domain cluster:
rep: gwf1_scaffold_41_prodigal-single.1__X__X__00175__D182-277
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1g8pA02 | 1.10.8.80 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Magnesium chelatase subunit I, C-Terminal domain | 0.72 | 45.0 | 5.34e-01 | 94.7% | 92.3% |
| 2ficB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.57 | 47.0 | 3.92e-01 | 88.6% | 83.1% |
| 3pmcA00 | 1.10.490.70 | Mainly Alpha › Orthogonal Bundle › Globin-like › Histidine kinase N-terminal domain | 0.56 | 43.0 | 4.10e-01 | 99.1% | 69.7% |
| 3hmfA00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.54 | 49.0 | 4.87e-01 | 98.2% | 95.7% |
| 5yixA00 | 1.10.601.10 | Mainly Alpha › Orthogonal Bundle › RNA Polymerase Primary Sigma Factor › RNA Polymerase Primary Sigma Factor | 0.54 | 44.0 | 3.16e-01 | 86.8% | 55.2% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 38.0 | 3.73e-01 | 83.3% | 69.2% |
| 4bw5C00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 41.0 | 3.27e-01 | 82.5% | 58.8% |
| 1cpcB00 | 1.10.490.20 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins | 0.52 | 43.0 | 3.80e-01 | 100.0% | 61.0% |
| 3ikhA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 35.0 | 2.60e-01 | 74.6% | 28.0% |
| 4xxiA00 | 1.10.490.20 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins | 0.51 | 40.0 | 3.75e-01 | 99.1% | 66.0% |
| 2yqdA00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.51 | 45.0 | 4.51e-01 | 98.2% | 95.8% |
| 3hyuA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 42.0 | 3.96e-01 | 100.0% | 73.0% |
| 5oklA01 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.51 | 41.0 | 4.29e-01 | 96.5% | 100.0% |
| 1or4B00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 39.0 | 3.58e-01 | 84.2% | 82.9% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3595345 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.72 | 52.0 | 5.77e-01 | 86.8% | 93.3% |
| 3416059 | 148.1.1.25 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Tim17 | 0.71 | 63.0 | 5.60e-01 | 93.9% | 76.1% |
| 4971995 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.69 | 49.0 | 5.48e-01 | 95.6% | 93.3% |
| 5073394 | 148.1.3.20 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 | 0.68 | 51.0 | 5.64e-01 | 95.6% | 97.8% |
| 3285896 | 148.1.3.20 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 | 0.65 | 48.0 | 5.14e-01 | 95.6% | 88.0% |
| 4997973 | 148.1.3.20 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 | 0.65 | 51.0 | 5.14e-01 | 95.6% | 81.7% |
| 4997798 | 148.1.3.20 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 | 0.64 | 48.0 | 4.94e-01 | 92.1% | 81.8% |
| 3640674 | 148.1.1.43 ↗ | alpha arrays › Histone-like › Histone-related › Histone › PF30969 | 0.63 | 55.0 | 5.44e-01 | 93.9% | 93.3% |
| 4997975 | 148.1.3.20 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 | 0.63 | 47.0 | 4.83e-01 | 93.9% | 80.0% |
| 3655748 | 601.1.2.118 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › CASP_dom | 0.63 | 56.0 | 5.14e-01 | 98.2% | 88.5% |
| 5062884 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.61 | 49.0 | 4.03e-01 | 86.8% | 78.6% |
| 3770076 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.59 | 52.0 | 3.55e-01 | 97.4% | 79.8% |
| 3509694 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.57 | 48.0 | 4.28e-01 | 92.1% | 70.9% |
| 4032308 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.55 | 50.0 | 4.35e-01 | 99.1% | 83.5% |
| 3639859 | 5001.1.1.62 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › YIF1 | 0.54 | 47.0 | 3.93e-01 | 95.6% | 76.0% |
| 3878199 | 633.1.1.1 ↗ | alpha bundles › Bromodomain-like › Bromodomain › Bromodomain › Bromodomain | 0.54 | 48.0 | 4.36e-01 | 96.5% | 72.7% |
| 1883344 | 604.39.1.4 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › ABC_cobalt | 0.54 | 45.0 | 3.83e-01 | 93.0% | 62.9% |
| 3236000 | 5001.1.1.27 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Sre | 0.52 | 44.0 | 3.27e-01 | 94.7% | 85.7% |
| 3802509 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.52 | 43.0 | 3.92e-01 | 89.5% | 80.0% |
| 3241626 | 5001.1.1.27 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Sre | 0.51 | 45.0 | 3.38e-01 | 100.0% | 84.4% |