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MH673673.1__AYJ73922.1__phiLo_70__00070

Bact-Vir

MH673673.1__AYJ73922.1__phiLo_70__00070

Identity

Accession:
MH673673 ↗
Kingdom:
phage

Quality

83.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-110
PDB
Domain cluster: representative
CATH (57)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4e1sA00 2.40.160.160 Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain 0.82 72.0 5.27e-01 99.0% 37.2%
2oojA00 2.40.350.10 Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like 0.82 66.0 5.86e-01 84.4% 65.6%
4fqeA00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.81 69.0 5.62e-01 97.9% 51.2%
1p4tA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.78 72.0 6.05e-01 100.0% 71.6%
6wilA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.77 70.0 4.62e-01 96.9% 34.8%
3fidA00 2.40.128.140 Mainly Beta › Beta Barrel › Lipocalin › Outer membrane protein 0.76 69.0 4.78e-01 97.9% 51.4%
3qq2B00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.75 66.0 4.89e-01 97.9% 50.0%
3njtA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.75 67.0 4.60e-01 95.8% 33.9%
2vdfA00 2.40.128.100 Mainly Beta › Beta Barrel › Lipocalin › OPCA outer membrane adhesin/invasin 0.74 66.0 5.05e-01 99.0% 58.2%
1uynX00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.73 65.0 4.71e-01 100.0% 52.3%
3dzmB00 2.40.160.70 Mainly Beta › Beta Barrel › Porin › outer membrane protein from Thermus thermophilus HB27. 0.73 68.0 5.20e-01 100.0% 66.2%
3h4zB03 3.15.10.50 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › 0.72 64.0 5.12e-01 97.9% 84.3%
3eniC00 2.50.10.10 Mainly Beta › Clam › Bacteriochlorophyll-a Protein › Bacteriochlorophyll A 0.71 65.0 4.33e-01 100.0% 48.9%
3hx8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.70 53.0 4.81e-01 80.2% 96.9%
6r3wA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.70 58.0 4.87e-01 100.0% 54.0%
2zylA02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.69 63.0 4.82e-01 100.0% 51.2%
2bngC00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 54.0 4.70e-01 82.3% 86.4%
4afkA00 2.40.160.100 Mainly Beta › Beta Barrel › Porin › 0.69 60.0 3.88e-01 94.8% 34.4%
2a15A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 52.0 4.67e-01 81.2% 96.2%
1ygaA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.68 58.0 4.04e-01 96.9% 97.9%
3efmA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.66 58.0 3.73e-01 95.8% 30.3%
2ynkA00 2.40.160.130 Mainly Beta › Beta Barrel › Porin › Capsule assembly protein Wzi 0.65 59.0 3.80e-01 99.0% 87.5%
1a0sP00 2.40.170.10 Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type 0.65 59.0 3.86e-01 100.0% 32.7%
3os7A00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.65 56.0 3.88e-01 97.9% 97.3%
3ke7B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 51.0 4.60e-01 85.4% 88.7%
3gwrB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 51.0 4.64e-01 85.4% 93.7%
3k0zA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 52.0 4.51e-01 88.5% 92.6%
6secA03 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.63 54.0 3.94e-01 97.9% 98.6%
2ciuA00 3.10.450.320 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 0.63 52.0 4.83e-01 90.6% 92.7%
3er7B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 50.0 4.58e-01 84.4% 95.9%
2oq8A00 2.60.40.2930 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 46.0 3.92e-01 78.1% 57.3%
3mi6A01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.61 52.0 3.74e-01 97.9% 96.1%
1a2vA03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.60 53.0 3.47e-01 100.0% 88.4%
3dcdA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.60 52.0 3.73e-01 97.9% 96.7%
1f49A05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.60 51.0 3.70e-01 95.8% 96.2%
4r7kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 52.0 4.38e-01 96.9% 59.5%
3ub1D02 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 45.0 4.29e-01 79.2% 91.2%
1kmoA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.59 51.0 3.20e-01 93.8% 30.4%
2xn1A01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.59 47.0 3.36e-01 87.5% 91.0%
1z6bA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.59 52.0 4.54e-01 95.8% 99.3%
1lshB00 2.20.90.10 Mainly Beta › Single Sheet › Lipovitellin-phosvitin complex; beta-sheet shell regions › Vitellinogen, beta-sheet shell domain 0.59 50.0 4.13e-01 93.8% 53.4%
3actA01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.58 52.0 3.75e-01 100.0% 93.3%
3jv1A00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.58 50.0 4.12e-01 97.9% 64.3%
3f1tB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 51.0 4.52e-01 97.9% 100.0%
7a0hA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.57 49.0 4.12e-01 97.9% 73.6%
2hdiA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.57 48.0 3.14e-01 94.8% 22.1%
2vckA00 3.40.1500.20 Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › 0.57 45.0 3.54e-01 86.5% 60.6%
2w4yA00 2.40.160.220 Mainly Beta › Beta Barrel › Porin › 0.57 47.0 4.36e-01 91.7% 83.6%
5e1vB00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.56 49.0 3.55e-01 96.9% 51.8%
4k02A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.56 48.0 4.40e-01 95.8% 97.6%
6jhpA01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.56 47.0 3.41e-01 96.9% 97.3%
5o16B00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.55 47.0 3.45e-01 95.8% 46.7%
1v7wA01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.55 48.0 3.45e-01 100.0% 87.1%
3kg8A01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 47.0 4.25e-01 97.9% 94.6%
2x9oA00 3.40.1500.20 Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › 0.52 45.0 3.47e-01 99.0% 92.3%
1pn2B01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 42.0 3.67e-01 90.6% 81.1%
7emfR01 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.50 41.0 3.40e-01 89.6% 84.6%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
874 9.13.1.3 beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3224 0.82 66.0 5.86e-01 84.4% 65.6%
3976425 5084.5.1.8 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM 0.80 73.0 5.56e-01 97.9% 52.4%
3164124 5084.1.1.4 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity 0.79 71.0 6.57e-01 97.9% 95.0%
4683047 5084.1.1.29 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF27340 0.79 73.0 6.01e-01 100.0% 73.3%
3983528 5084.3.1.2 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta 0.78 72.0 5.19e-01 100.0% 38.3%
5080405 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.78 70.0 5.80e-01 97.9% 82.3%
4009646 5084.3.1.2 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta 0.78 70.0 4.81e-01 99.0% 31.2%
3963279 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.78 72.0 4.92e-01 100.0% 42.2%
3975988 5084.3.1.2 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta 0.77 72.0 5.11e-01 100.0% 37.7%
4926981 9.13.1.0 beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like 0.76 70.0 6.35e-01 100.0% 84.0%
1298172 5084.5.1.8 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM 0.75 68.0 5.55e-01 97.9% 55.0%
3404731 5084.5.1.37 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Attacin_N, Attacin_C 0.75 61.0 4.93e-01 94.8% 46.7%
3352673 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.73 67.0 4.56e-01 100.0% 81.8%
3967762 5084.5.1.5 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.73 67.0 4.40e-01 100.0% 36.8%
3650853 9.13.1.1 beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › Dirigent 0.72 63.0 5.93e-01 100.0% 80.0%
3803010 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.71 65.0 4.72e-01 99.0% 60.4%
3309384 9.13.1.1 beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › Dirigent 0.70 64.0 5.98e-01 100.0% 91.6%
4265077 5084.1.1.34 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › DUF2715 0.69 61.0 5.15e-01 99.0% 75.6%
3391818 3070.2.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain 0.68 50.0 4.94e-01 76.0% 81.8%
5011158 331.3.1.7 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › COXG 0.68 60.0 5.21e-01 95.8% 71.5%
3838584 5084.5.1.25 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › HP_OMP_2 0.67 59.0 3.82e-01 96.9% 32.5%
3281686 331.3.1.27 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF2505 0.67 60.0 5.05e-01 100.0% 69.7%
3385986 5084.3.1.2 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta 0.67 61.0 4.77e-01 100.0% 81.3%
3646752 5084.5.1.23 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › TOC159_MAD 0.67 60.0 4.27e-01 99.0% 36.5%
4049663 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.67 57.0 3.76e-01 94.8% 22.1%
3952882 331.3.1.27 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF2505 0.66 59.0 4.88e-01 99.0% 69.0%
4022346 12.3.1.6 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N 0.66 58.0 4.06e-01 97.9% 93.1%
4670451 5084.5.4.9 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › UPF0164 0.66 58.0 4.08e-01 100.0% 56.1%
4010676 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.65 58.0 3.81e-01 100.0% 22.9%
3499326 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.65 58.0 4.14e-01 100.0% 37.4%
3403847 9.1.1.47 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Chitin_bind_4 0.65 42.0 4.40e-01 70.8% 71.1%
3514632 4291.1.1.1 beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.65 57.0 3.79e-01 96.9% 65.0%
3287036 331.3.1.27 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF2505 0.64 57.0 4.79e-01 100.0% 66.5%
3645939 5084.5.1.33 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › DNAJC11_beta-barrel 0.64 56.0 4.10e-01 100.0% 36.4%
3512069 5084.5.1.3 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 0.64 50.0 3.93e-01 99.0% 40.0%
3595544 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.64 56.0 4.01e-01 97.9% 38.8%
4937593 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.64 51.0 3.96e-01 99.0% 38.5%
2321076 5084.5.1.11 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 0.63 56.0 3.89e-01 96.9% 30.2%
3255116 4291.1.1.1 beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.63 54.0 3.76e-01 95.8% 63.9%
3263602 4291.1.1.1 beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.63 54.0 3.73e-01 97.9% 61.2%
3253869 4291.1.1.1 beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.63 53.0 3.66e-01 96.9% 61.9%
3253394 79.1.1.0 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain 0.62 52.0 4.35e-01 91.7% 59.5%
4659430 12.3.1.24 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas 0.61 52.0 3.81e-01 95.8% 87.7%
3651664 4291.1.1.1 beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.61 53.0 3.60e-01 97.9% 59.7%
4105670 5084.5.1.10 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › MDM10 0.59 48.0 3.33e-01 94.8% 25.7%
4021785 1100.1.1.0 beta meanders › TIP41-like protein › TIP41-like protein › TIP41-like protein 0.58 51.0 3.84e-01 97.9% 84.2%
3250326 1100.1.1.1 beta meanders › TIP41-like protein › TIP41-like protein › TIP41-like protein › TIP41 0.58 50.0 3.77e-01 97.9% 80.4%
3992499 1100.1.1.1 beta meanders › TIP41-like protein › TIP41-like protein › TIP41-like protein › TIP41 0.58 51.0 3.88e-01 99.0% 77.0%
3928712 1100.1.1.1 beta meanders › TIP41-like protein › TIP41-like protein › TIP41-like protein › TIP41 0.58 52.0 3.84e-01 100.0% 88.5%
3183221 1100.1.1.1 beta meanders › TIP41-like protein › TIP41-like protein › TIP41-like protein › TIP41 0.58 50.0 3.71e-01 97.9% 81.1%
4880357 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.57 51.0 4.54e-01 97.9% 69.4%
3192750 5.1.4.39 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC4_WD40 0.57 49.0 3.27e-01 100.0% 64.4%
4515973 5084.5.1.32 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › LOC400499 0.56 48.0 2.97e-01 92.7% 19.2%
4294460 12.3.1.24 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas 0.56 47.0 3.44e-01 95.8% 86.7%
147643 522.1.1.1 a+b two layers › Bacteriochlorophyll A protein › Bacteriochlorophyll A protein › Bacteriochlorophyll A protein › BChl_A 0.55 48.0 3.28e-01 96.9% 26.7%
3490071 71.2.1.4 beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › CATIP_N 0.55 49.0 3.70e-01 100.0% 56.2%
4302710 12.3.1.24 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas 0.55 47.0 3.54e-01 97.9% 92.3%
3502994 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.52 43.0 3.95e-01 91.7% 73.1%
5049570 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.51 42.0 3.27e-01 93.8% 81.3%