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MH673673.1__AYJ73978.1__phiLo_126__00126

Bact-Vir

MH673673.1__AYJ73978.1__phiLo_126__00126

Identity

Accession:
MH673673 ↗
Kingdom:
phage

Quality

84.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Thermus_phage_phiLo

TaxID: 2301536

Cluster

View cluster (40 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-116_227-237
PDB
Domain cluster: rep: LacPavin_0818_WC40_scaffold_269347_prodigal-single.1__X__X__00132__D47-143
D2 high residues 123-207
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ob9A00 3.30.2220.20 Alpha Beta › 2-Layer Sandwich › rbstp2171 › Phage tail assembly chaperone gp13-like 0.59 50.0 4.74e-01 100.0% 85.0%
1yw5A01 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.57 37.0 4.07e-01 97.6% 87.3%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.57 35.0 4.19e-01 85.9% 96.3%
1fvuB00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.57 36.0 3.28e-01 100.0% 45.5%
1gqeA03 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 34.0 3.50e-01 72.9% 61.4%
4o7oA02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.53 40.0 2.99e-01 83.5% 88.3%
1fy7A02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 44.0 3.91e-01 100.0% 95.5%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 30.0 3.23e-01 85.9% 67.1%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4537543 3103.1.1.4 ↗ alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Phage_TAC_9 0.58 51.0 4.52e-01 100.0% 93.6%
3870047 108.1.1.152 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › PF30398 0.55 39.0 3.22e-01 74.1% 81.2%
4029236 212.1.1.0 ↗ a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.54 39.0 3.12e-01 75.3% 72.1%
3345241 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.54 23.0 3.05e-01 75.3% 72.5%
3296910 386.1.1.207 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED_2 0.53 23.0 3.05e-01 76.5% 75.0%
5013205 7523.1.1.26 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_6 0.52 38.0 2.79e-01 78.8% 77.6%
3396171 6165.1.1.1 ↗ beta sandwiches › Piezo CTL2 domain › Piezo CTL2 domain › Piezo CTL2 domain › Piezo_RRas_bdg 0.50 43.0 3.22e-01 96.5% 99.5%
4073545 3352.1.1.3 ↗ alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT 0.50 43.0 2.78e-01 98.8% 92.0%