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MH673673.1__AYJ73980.1__phiLo_128__00128
Bact-VirMH673673.1__AYJ73980.1__phiLo_128__00128
Identity
- Accession:
- MH673673 ↗
- Kingdom:
- phage
Quality
66.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-64
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6grrB01 | 3.30.457.10 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Copper amine oxidase-like, N-terminal domain | 0.65 | 44.0 | 3.90e-01 | 100.0% | 46.8% |
| 2hcuA00 | 3.20.19.10 | Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 | 0.65 | 57.0 | 3.97e-01 | 100.0% | 93.8% |
| 2k4jA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 43.0 | 3.43e-01 | 73.6% | 53.3% |
| 1opcA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 45.0 | 3.68e-01 | 81.1% | 56.6% |
| 1v7lA01 | 3.20.19.10 | Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 | 0.60 | 52.0 | 3.77e-01 | 100.0% | 93.0% |
| 1dymA00 | 2.70.100.10 | Mainly Beta › Distorted Sandwich › 1,4-Beta-D-Glucan Cellobiohydrolase I; Chain A › Glycoside hydrolase, family 7, domain | 0.60 | 45.0 | 2.73e-01 | 84.9% | 72.3% |
| 3uuwB02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.59 | 40.0 | 2.79e-01 | 71.7% | 26.6% |
| 1x9yA01 | 3.10.500.10 | Alpha Beta › Roll › prostaphopain b, domain 1 › Staphopain proregion domain | 0.58 | 51.0 | 3.59e-01 | 100.0% | 38.8% |
| 2hqrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 42.0 | 3.38e-01 | 79.2% | 51.9% |
| 2bf6A02 | 2.40.220.10 | Mainly Beta › Beta Barrel › Intramolecular trans-sialidase; domain 3 › Intramolecular Trans-sialidase; Domain 3 | 0.57 | 37.0 | 3.49e-01 | 73.6% | 53.0% |
| 2mlkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 39.0 | 3.10e-01 | 73.6% | 50.0% |
| 2kd2A01 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.56 | 47.0 | 4.13e-01 | 100.0% | 78.6% |
| 2ogjA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.55 | 40.0 | 3.12e-01 | 77.4% | 52.2% |
| 4xw3A00 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.55 | 46.0 | 3.27e-01 | 100.0% | 71.1% |
| 2i3cA02 | 2.20.25.160 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.54 | 39.0 | 4.03e-01 | 79.2% | 100.0% |
| 4bucA02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.54 | 39.0 | 2.64e-01 | 75.5% | 58.3% |
| 3q0iA02 | 3.10.25.10 | Alpha Beta › Roll › Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2 › Formyl transferase, C-terminal domain | 0.53 | 40.0 | 3.40e-01 | 90.6% | 84.8% |
| 3au0A01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 39.0 | 2.90e-01 | 84.9% | 49.7% |
| 6dlzA01 | 1.20.140.150 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.51 | 42.0 | 3.01e-01 | 100.0% | 58.6% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3606756 | 4357.1.1.0 ↗ | beta barrels › WWE domain › WWE domain › WWE domain | 0.74 | 45.0 | 4.34e-01 | 75.5% | 55.0% |
| 4388250 | 5.1.4.26 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Reg_prop | 0.59 | 50.0 | 3.15e-01 | 100.0% | 42.5% |
| 3969337 | 101.1.2.8 ↗ | alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C | 0.59 | 41.0 | 3.30e-01 | 73.6% | 65.4% |
| 3344073 | 2004.1.1.26 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin | 0.58 | 39.0 | 2.79e-01 | 71.7% | 27.8% |
| 4854841 | 7512.1.1.6 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_20 | 0.58 | 38.0 | 2.65e-01 | 73.6% | 17.5% |
| 2387772 | 3232.1.1.2 ↗ | alpha arrays › PB2 '627' domain-related › PB2 '627' domain-related › Polymerase basic protein 2 (PB2) '627' domain › Flu_PB2_6th | 0.57 | 41.0 | 2.98e-01 | 75.5% | 46.2% |
| 4287145 | 375.1.1.37 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TF_Zn_Ribbon | 0.57 | 37.0 | 3.58e-01 | 81.1% | 58.3% |
| 5023273 | 4294.1.1.12 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Zn_Ribbon_TF | 0.57 | 37.0 | 3.80e-01 | 73.6% | 68.0% |
| 4367278 | 325.1.8.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein | 0.57 | 39.0 | 3.58e-01 | 71.7% | 60.0% |
| 4345162 | 304.48.1.11 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RNA_pol | 0.57 | 39.0 | 2.82e-01 | 79.2% | 23.7% |
| 4943911 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.55 | 42.0 | 2.63e-01 | 81.1% | 65.1% |
| 5038575 | 7512.1.1.6 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_20 | 0.54 | 37.0 | 2.50e-01 | 75.5% | 45.6% |
| 4059081 | 2006.1.1.11 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 | 0.53 | 43.0 | 2.85e-01 | 90.6% | 61.8% |
| 348036 | 3232.1.1.2 ↗ | alpha arrays › PB2 '627' domain-related › PB2 '627' domain-related › Polymerase basic protein 2 (PB2) '627' domain › Flu_PB2_6th | 0.53 | 39.0 | 2.92e-01 | 83.0% | 44.2% |
| 3655173 | 375.13.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain | 0.52 | 36.0 | 3.69e-01 | 88.7% | 80.0% |
| 4213544 | 270.1.1.2 ↗ | beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Formyl_trans_C | 0.51 | 39.0 | 3.28e-01 | 90.6% | 81.9% |
| 4929178 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.51 | 32.0 | 2.23e-01 | 81.1% | 16.1% |