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MH673674.1__AYJ74823.1__phiMa_40__00040

Bact-Vir

MH673674.1__AYJ74823.1__phiMa_40__00040

Identity

Accession:
MH673674 ↗
Kingdom:
phage

Quality

77.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-91
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04717.19 best Phage_base_V 36.9 5.20e-09 64.8% 65.3%
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3qr8A01 2.40.50.230 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain 0.87 65.0 6.64e-01 100.0% 81.0%
3zjyC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.83 55.0 5.99e-01 100.0% 81.1%
2dgyA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.83 58.0 6.15e-01 100.0% 81.0%
2exdA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.83 49.0 5.36e-01 100.0% 71.6%
1t9hA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.81 57.0 6.18e-01 100.0% 87.7%
1d7qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.78 54.0 4.56e-01 100.0% 44.1%
2qgqA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.78 51.0 6.10e-01 97.7% 98.3%
4uhvA04 2.40.50.230 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain 0.76 68.0 6.41e-01 100.0% 80.6%
2r7dA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.75 49.0 5.85e-01 98.9% 98.3%
1wthA01 2.40.50.260 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding protein domain 0.75 70.0 6.16e-01 100.0% 74.0%
2k14A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.75 50.0 5.19e-01 100.0% 72.6%
3k0xA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 48.0 4.65e-01 100.0% 62.6%
1ybyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 47.0 5.40e-01 100.0% 95.3%
4rg1A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 47.0 5.35e-01 100.0% 92.3%
3go5A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 50.0 5.26e-01 97.7% 82.3%
3trzA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 55.0 5.58e-01 100.0% 85.1%
2eqsA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 56.0 5.60e-01 100.0% 84.3%
3pqiA01 2.40.50.230 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain 0.70 60.0 6.24e-01 98.9% 98.8%
1yezA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 42.0 4.70e-01 100.0% 79.4%
3o2zP00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 60.0 5.39e-01 100.0% 70.7%
1lm0A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 48.0 4.64e-01 100.0% 69.3%
1wi5A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 48.0 5.20e-01 98.9% 94.7%
2kjxA01 3.30.720.220 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.63 37.0 4.49e-01 71.6% 96.2%
1smxA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 53.0 5.33e-01 97.7% 92.0%
3m7nA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 50.0 5.11e-01 100.0% 94.2%
4qmgA02 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 51.0 4.28e-01 100.0% 58.3%
2e2dC02 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 50.0 4.98e-01 100.0% 95.7%
3iayA01 2.40.50.730 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 48.0 4.69e-01 100.0% 85.7%
3fhwA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 48.0 4.71e-01 100.0% 90.9%
6p1hB02 2.40.50.430 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 46.0 4.03e-01 100.0% 65.9%
1fsuA02 3.30.1120.10 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.51 31.0 3.00e-01 100.0% 50.0%
ECOD (79)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5003246 2.7.1.1 beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V 0.89 72.0 5.90e-01 100.0% 50.0%
3946740 2.7.1.1 beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V 0.89 66.0 6.60e-01 100.0% 75.6%
1731165 2.7.1.1 beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V 0.88 65.0 6.55e-01 100.0% 76.4%
4478927 2.1.1.11 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.85 59.0 5.65e-01 100.0% 63.0%
4927618 2.1.1.11 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.85 59.0 5.78e-01 100.0% 66.3%
3186247 2.1.1.11 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.85 60.0 5.20e-01 100.0% 50.0%
2468517 2.7.1.1 beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V 0.84 69.0 5.33e-01 100.0% 42.7%
4980752 2.1.1.11 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.84 58.0 5.47e-01 100.0% 60.0%
4935688 2.1.1.11 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.84 58.0 5.57e-01 100.0% 63.0%
4343591 2.1.1.11 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.83 59.0 5.51e-01 100.0% 61.0%
4552597 2.1.1.11 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.83 59.0 6.04e-01 100.0% 76.2%
4103220 2.1.1.11 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.83 58.0 6.28e-01 100.0% 85.3%
4957569 2.7.1.1 beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V 0.83 67.0 6.51e-01 100.0% 77.9%
5058911 2.7.1.0 beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N 0.82 71.0 6.47e-01 100.0% 72.7%
4995814 2.7.1.1 beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V 0.80 70.0 5.59e-01 100.0% 50.6%
5043741 2.1.1.21 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Methyltrn_RNA_3 0.79 50.0 5.38e-01 100.0% 74.7%
4973279 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.79 48.0 5.36e-01 98.9% 77.1%
5037071 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.77 48.0 5.90e-01 95.5% 100.0%
None 0.77 69.0 4.80e-01 100.0% 32.8%
None 0.77 69.0 6.71e-01 100.0% 87.4%
4083610 2.1.1.100 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM_2 0.77 53.0 6.14e-01 97.7% 96.9%
4413978 79.1.1.0 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain 0.77 68.0 4.73e-01 100.0% 31.9%
3971883 79.1.1.0 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain 0.77 68.0 4.35e-01 100.0% 22.4%
3728167 2.1.1.21 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Methyltrn_RNA_3 0.77 49.0 5.13e-01 100.0% 71.2%
4526081 2.1.1.73 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RsgA_N 0.77 55.0 6.17e-01 100.0% 94.3%
3970828 2.7.1.0 beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N 0.76 68.0 5.11e-01 100.0% 42.6%
4046344 2.1.1.73 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RsgA_N 0.76 55.0 6.12e-01 97.7% 92.9%
3970551 2.7.1.1 beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V 0.76 68.0 5.23e-01 100.0% 46.1%
4654307 2.1.1.73 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RsgA_N 0.76 54.0 6.08e-01 97.7% 92.9%
3967453 2.7.1.1 beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V 0.76 67.0 6.58e-01 100.0% 87.4%
4379699 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.76 51.0 5.89e-01 97.7% 93.8%
4067858 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 55.0 6.10e-01 100.0% 95.7%
3403141 2.1.1.7 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.74 50.0 5.34e-01 98.9% 81.3%
3943688 2.7.1.1 beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V 0.73 68.0 5.23e-01 100.0% 48.3%
3244961 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 49.0 5.05e-01 98.9% 71.8%
4943372 2.1.1.361 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EIF_2_alpha 0.72 55.0 5.81e-01 98.9% 88.7%
4231997 2.1.1.7 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.70 52.0 4.98e-01 98.9% 68.0%
3244962 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 49.0 5.30e-01 98.9% 85.3%
3244964 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 51.0 5.15e-01 98.9% 75.6%
5035886 2.1.1.7 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.70 53.0 5.70e-01 98.9% 93.3%
3940947 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 56.0 3.70e-01 100.0% 22.7%
5011502 236.3.1.1 beta barrels › GroES-like › AF1531-like › AF1531-like › DUF655 0.69 52.0 5.60e-01 93.2% 92.0%
4002804 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 50.0 5.09e-01 100.0% 77.6%
3977606 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 53.0 5.04e-01 98.9% 70.0%
4517055 2.1.1.7 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.69 52.0 4.87e-01 98.9% 65.7%
3578306 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 45.0 4.85e-01 100.0% 78.7%
4165211 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.69 63.0 5.29e-01 100.0% 98.6%
4376939 2.1.1.18 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.69 51.0 5.65e-01 100.0% 98.6%
3953859 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 46.0 5.13e-01 98.9% 95.4%
4966111 2.1.1.378 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF26006 0.66 52.0 5.55e-01 100.0% 97.3%
3511673 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.65 48.0 3.35e-01 98.9% 23.8%
3861944 2.1.1.18 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.65 49.0 5.33e-01 98.9% 94.7%
3655400 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 58.0 4.94e-01 100.0% 71.4%
3485640 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 50.0 4.65e-01 100.0% 68.2%
5029258 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 56.0 5.41e-01 100.0% 85.0%
3716427 2.1.1.224 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29084 0.63 43.0 3.83e-01 100.0% 49.6%
3741507 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.63 56.0 5.40e-01 100.0% 94.0%
3785641 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 50.0 5.34e-01 96.6% 100.0%
3595817 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 55.0 5.17e-01 100.0% 92.7%
5053183 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 52.0 4.68e-01 100.0% 66.4%
4964458 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 55.0 5.16e-01 100.0% 81.9%
4968816 2.1.1.17 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.61 52.0 5.13e-01 100.0% 88.4%
3258020 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 55.0 4.85e-01 100.0% 70.8%
3226684 2.3.1.0 beta barrels › OB-fold › TIMP-like › TIMP-like 0.61 50.0 4.52e-01 100.0% 66.7%
3599542 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 54.0 5.01e-01 98.9% 80.0%
5009490 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 54.0 4.88e-01 100.0% 78.3%
3413189 2.1.1.141 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › WCOB 0.60 55.0 4.42e-01 100.0% 62.4%
3880555 2.1.1.290 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29066 0.60 54.0 4.63e-01 100.0% 71.4%
3712485 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 52.0 4.10e-01 100.0% 46.7%
4940391 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 51.0 4.58e-01 100.0% 68.0%
3269184 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 53.0 5.23e-01 98.9% 97.9%
4954140 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 49.0 4.41e-01 100.0% 64.6%
5061616 2.6.1.0 beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.59 53.0 5.35e-01 100.0% 97.8%
3578390 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 46.0 3.64e-01 100.0% 40.5%
3309415 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 42.0 4.09e-01 100.0% 69.0%
3833180 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 52.0 4.73e-01 100.0% 76.5%
3931897 69.1.2.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › AXH › AXH 0.57 44.0 3.93e-01 83.0% 69.6%
None 0.54 48.0 3.17e-01 100.0% 24.1%
371 2.1.1.28 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › mRNA_cap_C 0.53 47.0 4.03e-01 100.0% 64.8%
D2 high residues 102-177
PDB
Domain cluster: representative
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5kiqA02 3.10.20.890 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.68 36.0 3.69e-01 80.3% 52.8%
3p34A02 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.66 52.0 4.85e-01 85.5% 78.4%
4py5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.66 45.0 4.65e-01 78.9% 75.0%
4g7nA02 3.30.1120.130 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.64 50.0 4.65e-01 84.2% 74.2%
2v43A01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.63 53.0 4.03e-01 93.4% 55.7%
4g59C02 3.30.500.30 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.61 48.0 3.83e-01 85.5% 49.4%
4fr9A00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 42.0 3.44e-01 77.6% 97.2%
6gh3A01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.55 47.0 3.18e-01 100.0% 76.9%
1u4cB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 43.0 2.80e-01 84.2% 97.6%
2ktsA01 2.40.128.270 Mainly Beta › Beta Barrel › Lipocalin › 0.54 48.0 4.37e-01 100.0% 90.2%
3v5nB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.54 42.0 3.24e-01 85.5% 84.8%
1b44D00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 37.0 3.29e-01 71.1% 75.5%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 30.0 3.24e-01 80.3% 63.6%
2e11A00 3.60.110.10 Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase 0.53 44.0 3.19e-01 98.7% 79.6%
2bhoA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.53 39.0 3.48e-01 78.9% 79.1%
1rwiA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.52 44.0 3.15e-01 98.7% 88.3%
6ixwB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.52 37.0 2.95e-01 96.1% 35.8%
1ryp200 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.52 38.0 2.81e-01 81.6% 79.4%
4u3qB00 2.40.128.640 Mainly Beta › Beta Barrel › Lipocalin › 0.51 38.0 3.57e-01 98.7% 63.6%
3ow8C00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 41.0 2.86e-01 96.1% 71.3%
4v1ap00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.50 37.0 3.46e-01 78.9% 94.8%
ECOD (31)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3187834 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.76 60.0 5.08e-01 84.2% 90.0%
5074928 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.76 52.0 5.54e-01 78.9% 83.1%
4302456 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.70 54.0 5.10e-01 81.6% 83.3%
3272708 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.70 55.0 5.44e-01 84.2% 92.5%
4944335 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.65 49.0 4.63e-01 100.0% 66.7%
4943946 331.2.1.0 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain 0.65 50.0 4.73e-01 100.0% 68.9%
3505182 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 46.0 4.58e-01 75.0% 76.2%
4023063 216.1.1.8 a+b two layers › UBC-like › UBC-like › UBC-like › Knl1_RWD_C 0.65 48.0 4.46e-01 78.9% 86.3%
4020351 243.1.1.50 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › LIM_bind 0.64 54.0 4.10e-01 93.4% 61.4%
3639211 243.1.1.50 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › LIM_bind 0.63 52.0 3.87e-01 93.4% 56.7%
3490377 331.19.1.3 a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains › CPSF73-100_C 0.62 48.0 4.77e-01 100.0% 80.0%
3774338 292.2.1.6 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › DUF4520 0.62 53.0 4.71e-01 94.7% 83.6%
3696923 243.1.1.50 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › LIM_bind 0.59 42.0 3.15e-01 76.3% 63.5%
3163656 7515.1.1.2 a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Sulfatase 0.59 46.0 3.00e-01 84.2% 21.2%
3594393 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.57 45.0 4.51e-01 100.0% 83.7%
999859 79.1.1.12 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Gp138_C 0.57 39.0 3.44e-01 71.1% 49.5%
3370807 386.1.1.372 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › SWIM 0.57 45.0 4.08e-01 100.0% 62.4%
3717628 5.1.3.242 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF7914 0.56 41.0 2.76e-01 78.9% 64.5%
3739666 247.1.1.38 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C 0.56 47.0 4.53e-01 98.7% 80.0%
3798068 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.56 40.0 2.85e-01 75.0% 43.6%
3599618 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.56 40.0 2.86e-01 75.0% 27.3%
4346967 331.2.1.8 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › CPSF73-100_C 0.54 46.0 4.36e-01 98.7% 80.0%
4943121 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.54 40.0 2.53e-01 80.3% 32.1%
3993370 5.1.3.25 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Mcl1_mid 0.54 46.0 3.14e-01 97.4% 26.9%
3598659 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 45.0 2.97e-01 98.7% 93.3%
3290377 5.1.3.139 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Str_synth, SGL, SSL_N 0.53 44.0 3.13e-01 98.7% 95.9%
3718321 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.53 45.0 2.73e-01 93.4% 82.6%
3515415 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 42.0 2.39e-01 93.4% 58.0%
3680446 5.1.10.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.50 44.0 3.64e-01 96.1% 63.7%
3935137 5.1.3.152 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Str_synth, SSL_N 0.50 42.0 2.79e-01 97.4% 73.7%
3591883 5.1.4.169 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.50 41.0 2.82e-01 94.7% 92.4%
D3 high residues 188-275
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3pqhA01 2.20.220.20 Mainly Beta › Single Sheet › Glycosyl hydrolase fold › 0.92 59.0 7.19e-01 100.0% 96.7%
1wthA02 3.10.450.190 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.80 43.0 4.05e-01 76.1% 46.1%
4ld1A00 2.60.450.20 Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › 0.79 54.0 4.42e-01 100.0% 39.5%
4by2B00 2.60.450.20 Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › 0.72 50.0 4.12e-01 100.0% 40.6%
3p34A02 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.69 41.0 4.01e-01 81.8% 53.6%
2af5A02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.69 56.0 4.79e-01 100.0% 55.8%
5aq1A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.62 45.0 3.14e-01 75.0% 62.7%
4dsdA00 3.40.1420.30 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › 0.55 50.0 4.46e-01 100.0% 71.4%
1shyB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 46.0 2.99e-01 100.0% 55.1%
2oqcA00 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.53 40.0 2.78e-01 81.8% 92.1%
2bjfA01 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.52 40.0 2.78e-01 83.0% 96.9%
2b4wA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.52 46.0 3.26e-01 100.0% 43.3%
2sliA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 43.0 3.32e-01 92.0% 70.4%
7wrgA02 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.51 35.0 3.09e-01 71.6% 64.4%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
999859 79.1.1.12 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Gp138_C 0.92 59.0 5.48e-01 100.0% 54.2%
3471142 77.3.1.0 beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain 0.78 54.0 4.09e-01 100.0% 32.6%
4030652 77.3.1.0 beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain 0.77 52.0 4.29e-01 100.0% 40.7%
3711004 77.3.1.1 beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › Tcp10_C 0.76 51.0 4.53e-01 100.0% 48.8%
3279025 77.3.1.0 beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain 0.72 51.0 3.57e-01 100.0% 25.1%
3504473 77.3.1.0 beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain 0.72 51.0 3.96e-01 100.0% 35.6%
3717674 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.70 45.0 4.51e-01 96.6% 63.3%
3706670 292.2.1.6 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › DUF4520 0.69 45.0 4.15e-01 83.0% 52.7%
3599237 292.2.1.0 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.68 46.0 4.57e-01 95.5% 67.8%
3592336 77.2.1.0 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N 0.66 53.0 4.71e-01 100.0% 61.7%
4797891 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.66 39.0 4.39e-01 90.9% 75.4%
4302456 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.65 43.0 4.31e-01 96.6% 65.6%
4291626 292.2.1.0 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.65 43.0 4.20e-01 96.6% 62.1%
4797890 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.61 38.0 3.95e-01 81.8% 65.9%
3707862 79.1.1.0 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain 0.60 48.0 5.07e-01 100.0% 93.8%
3884681 292.2.1.10 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › C5orf34-like_N 0.59 38.0 3.69e-01 77.3% 58.9%
3703649 292.2.1.0 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.59 48.0 5.01e-01 100.0% 93.8%
4120507 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.59 39.0 3.86e-01 83.0% 63.2%
3774338 292.2.1.6 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › DUF4520 0.58 41.0 3.81e-01 80.7% 59.1%
3474473 77.3.1.0 beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain 0.56 49.0 3.89e-01 100.0% 47.0%
3884680 292.2.1.6 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › DUF4520 0.55 42.0 3.90e-01 80.7% 66.4%
3187834 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.53 43.0 3.87e-01 95.5% 64.2%
3707641 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 45.0 3.01e-01 100.0% 38.4%