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AXN53385.1

Arc-Vir

MH674343__AXN53385.1__Drs3-00004__00004

Identity

Accession:
MH674343 ↗
Protein ID:
AXN53385.1 ↗
Kingdom:
archaea

Quality

90.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Methanobavirales› Anaerodiviridae› Metforvirus› Methanobacterium_virus_Drs3

TaxID: 1430441

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-65
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qgnA02 1.10.287.890 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 0.65 48.0 4.39e-01 77.8% 91.5%
1e94E03 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.64 47.0 4.00e-01 77.8% 59.4%
3t38A01 1.10.8.1060 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Corynebacterium glutamicum thioredoxin-dependent arsenate reductase, N-terminal domain 0.64 45.0 4.40e-01 76.2% 85.9%
2mgwA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.62 37.0 3.97e-01 71.4% 71.2%
3fnrA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.60 46.0 2.99e-01 84.1% 28.0%
4rv9A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 41.0 2.94e-01 73.0% 74.1%
3wxyA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.59 41.0 3.16e-01 73.0% 83.1%
7yj5A02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.58 41.0 3.18e-01 76.2% 82.6%
2v3sA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.58 34.0 2.96e-01 98.4% 36.5%
5ucoA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.58 40.0 3.18e-01 76.2% 80.4%
2g5gX02 1.10.8.760 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Haem-binding uptake, Tiki superfamily, ChaN, domain 2 0.56 42.0 4.35e-01 85.7% 100.0%
1tedA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.54 37.0 2.96e-01 74.6% 80.5%
2icwG02 1.10.10.530 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › mam-mhc complex, Chain D, Domain 2 0.51 42.0 3.84e-01 95.2% 76.4%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3586991 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.79 51.0 4.80e-01 76.2% 56.0%
3653641 10.12.1.3 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.70 44.0 2.85e-01 73.0% 15.2%
2865 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.68 54.0 4.85e-01 85.7% 64.0%
3173088 223.2.1.19 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_1 0.68 45.0 3.28e-01 74.6% 26.9%
1515981 7581.1.1.6 ↗ a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Chal_sti_synt_C 0.62 46.0 3.52e-01 81.0% 80.9%
3264693 181.1.1.0 ↗ alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins 0.61 44.0 4.14e-01 74.6% 82.4%
1489443 7581.1.1.6 ↗ a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Chal_sti_synt_C 0.60 44.0 3.33e-01 82.5% 85.5%
4972725 3883.1.1.1 ↗ alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf 0.59 43.0 3.03e-01 76.2% 53.8%
3281161 632.22.1.100 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › PF28103 0.58 44.0 3.96e-01 79.4% 85.9%
3716063 4156.1.1.4 ↗ alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_C 0.58 44.0 3.54e-01 88.9% 42.1%
3662464 7581.1.1.6 ↗ a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Chal_sti_synt_C 0.58 42.0 3.21e-01 81.0% 81.2%
3450312 7581.1.1.6 ↗ a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Chal_sti_synt_C 0.55 40.0 3.00e-01 79.4% 71.7%
2819342 3788.1.1.1 ↗ alpha bundles › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › VPR 0.55 42.0 4.25e-01 88.9% 95.3%
3734687 2004.1.1.159 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.54 43.0 2.98e-01 96.8% 79.3%
3959072 7581.1.1.0 ↗ a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like 0.53 37.0 2.95e-01 73.0% 84.3%
3572003 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.52 43.0 3.50e-01 92.1% 51.7%
3953710 2006.1.4.2 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN 0.52 43.0 3.40e-01 95.2% 87.9%
None — 0.52 42.0 3.94e-01 90.5% 75.0%