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MH684921.1__AXN53724.1__SPS_13__00013
Bact-VirMH684921.1__AXN53724.1__SPS_13__00013
Identity
- Accession:
- MH684921 ↗
- Kingdom:
- phage
Quality
84.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Autonotataviridae›
Scottvirus›
Sphingomonas_phage_Scott
TaxID: 2282912
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-65
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF23793.2 best | LysC | 32.9 | 6.90e-08 | 92.2% | 66.2% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4nsmA00 | 6.10.250.2770 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.76 | 68.0 | 6.05e-01 | 98.0% | 81.7% |
| 2p3yA02 | 1.10.3360.10 | Mainly Alpha › Orthogonal Bundle › VPA0735-like fold › VPA0735-like domain | 0.58 | 47.0 | 3.69e-01 | 90.2% | 91.6% |
| 1b8pA02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.58 | 48.0 | 3.30e-01 | 92.2% | 29.7% |
| 8dqaA01 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.53 | 44.0 | 3.53e-01 | 90.2% | 70.4% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3278291 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.83 | 73.0 | 5.96e-01 | 96.1% | 56.7% |
| 3929501 | 5051.1.1.1 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › SNF | 0.80 | 72.0 | 4.01e-01 | 100.0% | 51.4% |
| 3593933 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.78 | 70.0 | 4.96e-01 | 98.0% | 76.0% |
| 3232516 | 5051.1.1.1 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › SNF | 0.77 | 67.0 | 3.82e-01 | 100.0% | 54.5% |
| 3818511 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.70 | 57.0 | 4.32e-01 | 94.1% | 63.8% |