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MH700630.1__AXP07737.1__SmphiM6_46__00045
Bact-VirMH700630.1__AXP07737.1__SmphiM6_46__00045
Identity
- Accession:
- MH700630 ↗
- Kingdom:
- phage
Quality
84.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-76
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1a49A01 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.65 | 45.0 | 3.30e-01 | 83.8% | 27.8% |
| 5x8tT00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.63 | 47.0 | 3.74e-01 | 80.9% | 50.7% |
| 1ri5A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 46.0 | 3.15e-01 | 79.4% | 99.2% |
| 1egaA02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.59 | 45.0 | 3.86e-01 | 80.9% | 91.5% |
| 1xmbA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 38.0 | 3.30e-01 | 73.5% | 46.5% |
| 2nlvA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.55 | 46.0 | 3.89e-01 | 91.2% | 88.4% |
| 4ubtD00 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.54 | 49.0 | 3.08e-01 | 100.0% | 59.3% |
| 2xe4A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 43.0 | 2.75e-01 | 89.7% | 85.1% |
| 2f2uB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 42.0 | 3.15e-01 | 88.2% | 93.5% |
| 4tpsD00 | 3.30.300.180 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › DnaA, N-terminal domain | 0.52 | 41.0 | 3.89e-01 | 86.8% | 98.8% |
| 3ddcB00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 35.0 | 2.95e-01 | 73.5% | 77.4% |
| 1kpsC00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.51 | 35.0 | 2.68e-01 | 70.6% | 71.8% |
| 1k8rB00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.50 | 36.0 | 3.42e-01 | 77.9% | 63.4% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3209844 | 3542.1.1.3 ↗ | alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Peptidase_A22B | 0.68 | 53.0 | 3.50e-01 | 85.3% | 52.5% |
| 4444942 | 2003.1.5.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › mRNA_G-N7_MeTrfase | 0.63 | 50.0 | 3.33e-01 | 86.8% | 92.4% |
| 5056801 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.62 | 50.0 | 4.13e-01 | 88.2% | 50.4% |
| 4948264 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.61 | 45.0 | 4.28e-01 | 80.9% | 66.3% |
| 4378801 | 7012.1.1.1 ↗ | a+b complex topology › Monotopic phosphoglycosyl transferase (PGT)-like › Monotopic phosphoglycosyl transferase (PGT)-like › Monotopic phosphoglycosyl transferase (PGT)-like › Bac_transf | 0.60 | 41.0 | 3.36e-01 | 70.6% | 66.9% |
| 3783427 | 7529.1.1.7 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro_2 | 0.60 | 45.0 | 2.92e-01 | 79.4% | 75.3% |
| 3961087 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.59 | 47.0 | 4.14e-01 | 88.2% | 98.1% |
| 3270674 | 109.2.1.18 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › GDE_C | 0.59 | 44.0 | 2.61e-01 | 79.4% | 32.7% |
| 4029177 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.58 | 43.0 | 3.47e-01 | 79.4% | 99.3% |
| 3197890 | 304.61.1.2 ↗ | a+b two layers › Alpha-beta plaits › Aldoxime dehydratase › Aldoxime dehydratase › Monooxy_af470-like | 0.58 | 47.0 | 3.30e-01 | 91.2% | 43.6% |
| 3964735 | 2.9.1.1 ↗ | beta barrels › OB-fold › RNB domain-like › RNB domain-like › RNB | 0.57 | 50.0 | 3.15e-01 | 100.0% | 31.7% |
| 3402108 | 108.2.1.2 ↗ | alpha arrays › EF-hand › Insect pheromone/odorant-binding proteins › Insect pheromone/odorant-binding proteins › OBP47_like | 0.57 | 41.0 | 3.19e-01 | 75.0% | 88.7% |
| 3218568 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.56 | 48.0 | 3.11e-01 | 95.6% | 54.4% |
| 3303720 | 3336.1.1.1 ↗ | alpha complex topology › plant-specific ROP nucleotide exchanger (PRONE) domain › plant-specific ROP nucleotide exchanger (PRONE) domain › plant-specific ROP nucleotide exchanger (PRONE) domain › PRONE | 0.56 | 43.0 | 2.66e-01 | 92.6% | 14.4% |
| 3627926 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.56 | 42.0 | 3.42e-01 | 82.4% | 84.4% |
| 3636298 | 5001.1.1.6 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Bac_rhodopsin | 0.56 | 43.0 | 2.97e-01 | 83.8% | 69.6% |
| 3492699 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.55 | 43.0 | 3.92e-01 | 86.8% | 70.5% |
| 3275754 | 11.1.1.818 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_TPPC8_2nd | 0.54 | 46.0 | 3.49e-01 | 94.1% | 70.0% |
| 1903970 | 7524.1.1.1 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh | 0.53 | 47.0 | 3.19e-01 | 100.0% | 51.2% |
| 1903968 | 7524.1.1.1 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh | 0.53 | 46.0 | 3.15e-01 | 100.0% | 48.7% |
| 3701325 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.53 | 36.0 | 3.42e-01 | 72.1% | 74.1% |
| 3596927 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.51 | 41.0 | 2.84e-01 | 91.2% | 78.4% |