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MH706966.1__AXN54158.1__mEp021_39__00039
Bact-VirMH706966.1__AXN54158.1__mEp021_39__00039
Identity
- Accession:
- MH706966 ↗
- Kingdom:
- phage
Quality
72.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-76
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gp0B02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.64 | 45.0 | 3.80e-01 | 73.0% | 97.6% |
| 3id6A01 | 3.30.420.220 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.61 | 48.0 | 4.35e-01 | 89.2% | 100.0% |
| 1iwmA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.60 | 41.0 | 3.16e-01 | 71.6% | 83.6% |
| 2nnwA01 | 3.30.420.220 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.59 | 46.0 | 4.01e-01 | 87.8% | 82.8% |
| 4py5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.57 | 34.0 | 3.51e-01 | 94.6% | 62.5% |
| 2gumB03 | 2.30.29.100 | Mainly Beta › Roll › PH-domain like › | 0.56 | 41.0 | 3.55e-01 | 78.4% | 70.2% |
| 2yf0A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 37.0 | 3.58e-01 | 70.3% | 81.6% |
| 3vn5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.55 | 33.0 | 3.39e-01 | 95.9% | 62.3% |
| 8cukB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 41.0 | 2.70e-01 | 81.1% | 89.5% |
| 2d0bA01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.54 | 34.0 | 3.24e-01 | 97.3% | 52.8% |
| 3ottB02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 41.0 | 2.75e-01 | 83.8% | 91.5% |
| 1w2tA02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.53 | 36.0 | 3.03e-01 | 70.3% | 76.1% |
| 4phtY02 | 3.30.420.370 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › GspL cytoplasmic domain, C-terminal subdomain | 0.53 | 36.0 | 3.85e-01 | 70.3% | 100.0% |
| 1g3pA01 | 2.30.27.10 | Mainly Beta › Roll › Phage FD Coat Protein, Membrane penetration domain › Phage FD Coat Protein,Membrane penetration domain | 0.52 | 42.0 | 4.00e-01 | 87.8% | 76.1% |
| 2ra2B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 35.0 | 3.86e-01 | 73.0% | 94.8% |
| 5tkwA02 | 3.30.420.370 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › GspL cytoplasmic domain, C-terminal subdomain | 0.51 | 35.0 | 3.64e-01 | 70.3% | 100.0% |
| 1lm4A00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.51 | 37.0 | 2.79e-01 | 82.4% | 30.5% |
| 4at7B02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.51 | 39.0 | 2.94e-01 | 83.8% | 76.4% |
| 2dk3A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.50 | 34.0 | 3.26e-01 | 70.3% | 74.4% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3788344 | 5.1.4.337 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, WD40_CDC20-Fz | 0.66 | 47.0 | 3.03e-01 | 75.7% | 82.3% |
| 3952816 | 245.2.1.2 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › DUF2710 | 0.62 | 37.0 | 3.98e-01 | 86.5% | 69.2% |
| 4024038 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.62 | 44.0 | 3.13e-01 | 75.7% | 97.9% |
| 3789476 | 5.1.4.307 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF29630 | 0.61 | 45.0 | 2.90e-01 | 79.7% | 95.2% |
| 1146605 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.60 | 41.0 | 3.16e-01 | 71.6% | 83.1% |
| 3991341 | 5.1.4.304 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR11_2nd | 0.60 | 52.0 | 3.09e-01 | 100.0% | 91.0% |
| 5013223 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.59 | 43.0 | 3.22e-01 | 79.7% | 81.0% |
| 5043198 | 3407.1.1.2 ↗ | mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc | 0.59 | 45.0 | 3.99e-01 | 85.1% | 85.2% |
| 4004179 | 220.1.1.22 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C | 0.58 | 39.0 | 2.86e-01 | 70.3% | 30.0% |
| 3981360 | 4.1.1.188 ↗ | beta barrels › SH3 › SH3 › SH3 › Imm26 | 0.57 | 47.0 | 4.00e-01 | 100.0% | 78.6% |
| 3407758 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.56 | 38.0 | 3.36e-01 | 70.3% | 58.3% |
| 4240482 | 5.1.4.298 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd | 0.56 | 43.0 | 2.75e-01 | 86.5% | 73.3% |
| 3485043 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.55 | 39.0 | 2.75e-01 | 74.3% | 85.7% |
| 5067782 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.55 | 32.0 | 3.32e-01 | 89.2% | 61.4% |
| 4168230 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.54 | 33.0 | 3.04e-01 | 77.0% | 49.5% |
| 3604573 | 5.1.4.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 | 0.54 | 43.0 | 2.58e-01 | 90.5% | 47.8% |
| 4077309 | 331.1.1.6 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF3378 | 0.52 | 34.0 | 3.39e-01 | 95.9% | 62.5% |
| 4000029 | 5.1.4.139 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_2 | 0.52 | 43.0 | 2.91e-01 | 97.3% | 38.2% |
| 4486492 | 3239.1.1.1 ↗ | alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 | 0.52 | 38.0 | 2.53e-01 | 79.7% | 33.9% |
| 5058484 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.51 | 30.0 | 3.10e-01 | 89.2% | 60.0% |
| 4950628 | 3740.1.1.4 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C | 0.50 | 44.0 | 3.02e-01 | 100.0% | 93.2% |
| 4964699 | 220.1.1.219 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch | 0.50 | 34.0 | 3.15e-01 | 71.6% | 84.0% |