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MH707429.1__AYJ76403.1__BSP12_217__00217

Bact-Vir

MH707429.1__AYJ76403.1__BSP12_217__00217

Identity

Accession:
MH707429 ↗
Kingdom:
phage

Quality

92.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Grisebachstrassevirus› Bacillus_phage_BSP12

TaxID: 2301652

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-123
PDB
Domain cluster: rep: js4906-25-2-S21_Prophage_curated_prodigal-single.1__X__X__00064__D3-114
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5ajiB03 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 33.0 3.65e-01 80.2% 75.8%
3h0gA05 1.10.132.30 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › RNA polymerase Rpb1 funnel domain 0.54 47.0 4.36e-01 96.6% 89.7%
4i9cA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 26.0 2.13e-01 79.3% 25.3%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3286750 109.4.1.45 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › BTAD 0.56 32.0 2.99e-01 79.3% 44.1%
3242284 1075.1.2.13 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › CNNM 0.54 46.0 4.22e-01 92.2% 90.7%
5036196 2002.1.1.57 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › URO-D 0.53 34.0 2.68e-01 89.7% 29.6%
3301847 633.4.1.1 ↗ alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.52 36.0 3.82e-01 87.1% 81.0%
3592915 70.3.1.1 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.50 42.0 3.05e-01 89.7% 50.6%
D2 high residues 126-298
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 22.0 3.39e-01 100.0% 92.4%
1nh8A03 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 21.0 3.45e-01 85.0% 100.0%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3580980 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 21.0 2.75e-01 91.3% 63.2%
4978554 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.52 27.0 3.45e-01 100.0% 84.0%