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MH707432.1__AYJ74241.1__BSP15_224__00223

Bact-Vir

MH707432.1__AYJ74241.1__BSP15_224__00223

Identity

Accession:
MH707432 ↗
Kingdom:
phage

Quality

64.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 41-85
PDB
Domain cluster: representative
CATH (59)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3layF00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.94 84.0 6.80e-01 95.6% 55.1%
3rx6A00 1.20.58.1090 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phage polarity suppression protein monomer 0.94 86.0 5.47e-01 97.8% 23.5%
3kkbA00 1.20.120.880 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Histidine kinase (KinB), sensor domain 0.89 79.0 5.58e-01 97.8% 35.7%
2jdiG01 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.89 77.0 6.90e-01 97.8% 70.5%
1wpaA01 6.10.140.340 Special › Helix non-globular › Helix Hairpins › 0.88 78.0 5.93e-01 97.8% 87.9%
1zbtA01 6.10.140.1950 Special › Helix non-globular › Helix Hairpins › 0.88 79.0 6.29e-01 97.8% 56.6%
3k6tB00 1.20.5.4010 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.87 74.0 7.21e-01 100.0% 83.7%
1urfA00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.87 76.0 6.21e-01 97.8% 54.3%
2cazD00 6.10.140.820 Special › Helix non-globular › Helix Hairpins › 0.87 76.0 6.88e-01 97.8% 85.0%
2y39A00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.86 77.0 5.63e-01 97.8% 40.0%
4jvyB00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.86 72.0 4.65e-01 100.0% 21.6%
3dkqA02 4.10.860.20 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain 0.86 72.0 7.11e-01 95.6% 89.4%
3gnlB02 1.10.287.1890 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.86 75.0 6.58e-01 100.0% 85.3%
3jcuZ00 1.10.287.740 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre 0.86 75.0 6.74e-01 97.8% 83.6%
3qf7A02 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.85 76.0 6.72e-01 97.8% 92.1%
4nb5B02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.85 73.0 6.54e-01 97.8% 85.9%
1yxrA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.85 65.0 5.49e-01 88.9% 51.4%
5lbmA00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.84 74.0 5.97e-01 97.8% 53.0%
4a4kA01 1.20.1500.20 Mainly Alpha › Up-down Bundle › YheA-like fold › 0.84 75.0 5.45e-01 97.8% 38.9%
2yevA02 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.84 70.0 5.94e-01 95.6% 56.8%
2ch7A00 1.10.287.950 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein 0.84 72.0 4.30e-01 97.8% 15.2%
2js5A00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.84 72.0 6.27e-01 100.0% 84.5%
4ceiA03 6.10.250.2380 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.83 73.0 5.39e-01 97.8% 49.1%
1s5jA04 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.83 68.0 6.12e-01 97.8% 67.2%
2yw6B00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.82 74.0 5.04e-01 100.0% 78.7%
3behB01 1.20.120.540 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels 0.81 70.0 5.21e-01 100.0% 63.2%
6fndA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.80 72.0 4.67e-01 100.0% 26.9%
3axjB02 1.20.58.200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 0.80 65.0 5.34e-01 97.8% 49.4%
3hr0B01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.80 67.0 5.66e-01 97.8% 58.2%
3wirA02 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.79 70.0 4.04e-01 100.0% 18.4%
2gsqA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.78 66.0 5.05e-01 97.8% 52.8%
3uarA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.78 62.0 4.76e-01 97.8% 38.3%
5b1oA00 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.75 62.0 5.63e-01 97.8% 81.5%
3ckcA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.74 64.0 4.24e-01 97.8% 28.2%
2pvqA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.73 62.0 4.73e-01 97.8% 57.5%
4l8jA04 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.71 58.0 5.46e-01 97.8% 78.0%
1vx7301 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.71 57.0 5.06e-01 100.0% 64.9%
4fvmA06 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.71 56.0 5.57e-01 97.8% 97.9%
3k1hA00 3.30.1120.180 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Flagellar FLiS export co-chaperone, HP1076 0.70 57.0 4.45e-01 100.0% 91.3%
4finB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 53.0 3.33e-01 93.3% 15.1%
3syvA01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.69 56.0 3.59e-01 97.8% 17.6%
1vf7A03 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.69 57.0 5.28e-01 97.8% 76.7%
2v57A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.68 53.0 3.58e-01 88.9% 22.8%
4asvA00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.67 51.0 4.41e-01 91.1% 50.6%
3b0cW00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.67 51.0 4.29e-01 82.2% 52.1%
3fppA03 6.10.140.1990 Special › Helix non-globular › Helix Hairpins › 0.67 54.0 4.50e-01 97.8% 52.3%
1iqpA03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.66 54.0 4.28e-01 91.1% 43.6%
4aurA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 55.0 3.45e-01 97.8% 17.0%
7ymiZ01 1.10.287.740 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre 0.65 50.0 4.85e-01 100.0% 77.6%
2pusA04 6.10.140.300 Special › Helix non-globular › Helix Hairpins › 0.64 51.0 4.02e-01 95.6% 39.8%
3zdmB00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.64 49.0 4.80e-01 91.1% 80.0%
4dyqA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 51.0 4.13e-01 100.0% 82.5%
6f1eA01 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.64 49.0 3.77e-01 100.0% 37.4%
1x4tA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.63 53.0 4.98e-01 97.8% 82.8%
3tklB01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.63 49.0 4.63e-01 100.0% 93.5%
3no6A00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.62 51.0 3.31e-01 95.6% 26.0%
4hehA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.61 53.0 4.39e-01 100.0% 66.3%
4ofzA01 1.20.58.1800 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 47.0 3.76e-01 97.8% 38.9%
8b9zK01 1.10.287.3510 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.60 48.0 3.98e-01 97.8% 47.3%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4940281 192.7.1.0 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.96 88.0 7.61e-01 97.8% 67.7%
3205582 605.8.1.2 alpha duplicates or obligate multimers › ROP-like › BAS1536-like › BAS1536-like › PF27894 0.95 86.0 7.49e-01 100.0% 67.7%
3211407 3652.1.1.0 alpha duplicates or obligate multimers › Qua1 › Qua1 › Qua1 0.93 85.0 8.20e-01 97.8% 88.0%
3502849 3712.1.1.1 a+b complex topology › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Med11 0.93 84.0 5.96e-01 97.8% 36.7%
4032379 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.93 87.0 7.13e-01 100.0% 78.7%
3631825 109.4.1.1407 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › STAG, SCD, HEAT_SCC3-SA 0.92 85.0 4.48e-01 100.0% 8.1%
4378877 3711.1.1.20 alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › DUF444 0.92 83.0 6.85e-01 97.8% 58.7%
3504399 109.4.1.1350 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › STAG, SCD, HEAT_SCC3-SA, PF31007 0.92 86.0 4.52e-01 100.0% 8.7%
3890044 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.91 82.0 7.05e-01 97.8% 64.7%
5050107 159.1.1.1 alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 › MazG 0.91 83.0 6.37e-01 100.0% 49.5%
4025879 632.2.1.42 alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › CLPTM1 0.91 81.0 5.52e-01 97.8% 30.3%
3944325 3711.1.1.20 alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › DUF444 0.91 82.0 6.61e-01 97.8% 55.0%
4648077 2006.1.6.38 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF444 0.91 82.0 4.90e-01 97.8% 16.0%
4440511 632.2.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains 0.91 82.0 7.62e-01 97.8% 80.0%
3983042 3711.1.1.3 alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › Metal_resist 0.90 81.0 6.29e-01 97.8% 48.9%
3239510 192.5.1.0 alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat 0.90 80.0 6.14e-01 97.8% 46.3%
3680604 246.3.1.17 a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › PF27823 0.90 80.0 4.79e-01 97.8% 15.4%
3905660 603.1.1.164 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SERTA 0.90 82.0 7.17e-01 100.0% 70.8%
3762595 604.7.1.13 alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › HR1 0.90 79.0 6.23e-01 97.8% 48.9%
3505608 192.29.1.1 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB_dom 0.90 81.0 6.68e-01 97.8% 58.7%
3356293 192.4.1.22 alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › PF26575 0.89 83.0 7.41e-01 100.0% 81.7%
4453815 192.12.1.1 alpha bundles › Long alpha-hairpin › Transcriptional repressor TraM › Transcriptional repressor TraM › Prok-TraM 0.89 81.0 6.21e-01 100.0% 76.8%
3942662 150.5.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.89 78.0 6.04e-01 97.8% 46.3%
3730423 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.87 78.0 4.56e-01 97.8% 13.8%
4945538 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.87 75.0 6.49e-01 97.8% 62.9%
4976691 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.86 77.0 6.58e-01 97.8% 62.9%
4132296 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.85 73.0 6.69e-01 97.8% 73.3%
4353 605.4.1.1 alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein › Rop 0.85 75.0 6.84e-01 97.8% 74.6%
4018370 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.85 75.0 5.33e-01 100.0% 77.7%
4013967 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.85 75.0 4.23e-01 97.8% 10.8%
3619662 192.12.1.3 alpha bundles › Long alpha-hairpin › Transcriptional repressor TraM › Transcriptional repressor TraM › DUF747 0.85 73.0 6.02e-01 97.8% 55.0%
5048862 2004.1.1.5 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.84 75.0 4.34e-01 100.0% 12.3%
1002194 192.23.1.1 alpha bundles › Long alpha-hairpin › DUF683 › DUF683 › Rop-like 0.83 71.0 6.16e-01 97.8% 62.0%
4156290 192.6.1.0 alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain 0.80 65.0 6.56e-01 95.6% 97.8%
5056427 3843.1.1.38 alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › T4SS_pilin 0.77 64.0 4.92e-01 97.8% 45.5%
4930182 2498.1.1.10 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 0.77 64.0 4.25e-01 97.8% 25.6%
4083064 192.6.1.0 alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain 0.76 65.0 6.26e-01 100.0% 90.6%
3939668 604.7.1.0 alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A 0.75 63.0 4.07e-01 100.0% 35.9%
4647835 4106.1.1.1 few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC 0.70 60.0 3.87e-01 100.0% 67.8%
3707613 3877.1.1.0 alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC 0.64 51.0 3.28e-01 97.8% 18.4%
4070494 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.63 48.0 2.89e-01 97.8% 14.2%
4952853 5058.1.1.2 alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st 0.63 54.0 4.30e-01 97.8% 48.4%