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MH707434.1__AYJ75564.1__BSP19_002__00002

Bact-Vir

MH707434.1__AYJ75564.1__BSP19_002__00002

Identity

Accession:
MH707434 ↗
Kingdom:
phage

Quality

74.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 21-123
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05037.19 best DUF669 27.9 3.30e-06 99.0% 73.2%
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1dgsA04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 49.0 5.65e-01 99.0% 98.6%
3nppA00 2.40.50.480 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Protein of unknown function DUF1093 0.69 42.0 4.49e-01 100.0% 71.3%
2vqeL00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 47.0 4.41e-01 100.0% 59.7%
2cwaA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 50.0 4.97e-01 100.0% 76.1%
3f2bA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 48.0 4.97e-01 100.0% 82.3%
2cqaA01 2.40.50.360 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain 0.65 43.0 4.85e-01 100.0% 93.2%
2k5vA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 45.0 4.66e-01 100.0% 77.6%
4gs3A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 47.0 5.00e-01 100.0% 91.1%
5tgnA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 33.0 3.28e-01 96.1% 47.7%
3u4vA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 46.0 4.45e-01 100.0% 69.8%
8aa9A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 48.0 4.64e-01 100.0% 74.6%
2e12A00 2.30.30.720 Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) 0.61 34.0 3.59e-01 79.6% 59.1%
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 51.0 5.02e-01 100.0% 85.5%
1ue6D00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 48.0 4.83e-01 100.0% 84.6%
1a0iA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 52.0 5.28e-01 100.0% 96.0%
3nwsA01 2.40.50.800 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 52.0 4.76e-01 100.0% 75.9%
2wkcB00 2.40.50.400 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Lactococcus phage single-stranded DNA binding protein 0.59 44.0 4.67e-01 100.0% 92.1%
5odnC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 47.0 4.78e-01 100.0% 89.2%
3fh1A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 32.0 3.06e-01 96.1% 45.1%
4hiaA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.58 40.0 3.34e-01 71.8% 92.0%
1se8A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 47.0 4.64e-01 100.0% 82.9%
3f1zI00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 52.0 5.01e-01 100.0% 92.2%
4bgjA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.56 50.0 4.79e-01 98.1% 99.2%
7x7zA01 2.40.480.10 Mainly Beta › Beta Barrel › AOC barrel-like › Allene oxide cyclase-like 0.55 43.0 3.95e-01 84.5% 97.8%
3f6gA02 3.30.160.340 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 32.0 3.96e-01 93.2% 95.2%
1i7dA03 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.55 43.0 3.86e-01 90.3% 61.0%
3ulpD00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 48.0 4.68e-01 100.0% 90.3%
2vw9B00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 47.0 4.69e-01 100.0% 94.3%
2i4kA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.54 45.0 4.26e-01 95.1% 98.4%
1ar0A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 33.0 3.14e-01 95.1% 50.4%
2hqsA01 3.40.50.10070 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TolB, N-terminal domain 0.53 34.0 3.11e-01 97.1% 46.5%
3iq2A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.53 45.0 4.30e-01 94.2% 91.1%
1jb3A00 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 43.0 4.12e-01 100.0% 74.8%
3cqnB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 39.0 3.37e-01 77.7% 78.9%
4ikbA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.52 44.0 4.16e-01 95.1% 93.8%
3q90B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 31.0 2.93e-01 95.1% 46.2%
1ocsA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.52 44.0 4.09e-01 95.1% 96.2%
4amwA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.52 45.0 3.25e-01 98.1% 91.2%
7kx7A03 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.52 34.0 2.71e-01 95.1% 32.1%
1aqbA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 38.0 3.26e-01 78.6% 77.7%
1h91A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 38.0 3.23e-01 79.6% 68.9%
2g8sB00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.51 35.0 2.46e-01 70.9% 56.8%
3hpcX00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.50 42.0 3.74e-01 94.2% 92.3%
ECOD (76)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3964606 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.82 77.0 6.39e-01 100.0% 71.2%
4033192 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.81 75.0 6.85e-01 100.0% 77.7%
143390 2.24.1.1 beta barrels › OB-fold › probable receptor YhhM › probable receptor YhhM › DUF2500 0.78 50.0 5.73e-01 100.0% 88.2%
3969377 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.77 48.0 5.53e-01 100.0% 87.8%
5037223 2.1.1.12 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S28e 0.75 42.0 5.45e-01 92.2% 96.7%
4091312 2.1.1.26 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB 0.72 50.0 5.42e-01 100.0% 85.9%
1954221 2.26.1.1 beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 0.72 49.0 5.61e-01 100.0% 94.7%
5074611 2.26.1.1 beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 0.70 51.0 5.66e-01 100.0% 96.2%
4230632 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.70 46.0 4.18e-01 93.2% 51.1%
3497521 2.3.1.0 beta barrels › OB-fold › TIMP-like › TIMP-like 0.69 54.0 5.01e-01 100.0% 66.2%
4932581 2.1.1.12 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S28e 0.69 40.0 4.96e-01 97.1% 92.3%
3876051 2.1.1.44 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 0.68 49.0 5.35e-01 100.0% 90.6%
5000502 2.1.1.12 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S28e 0.68 41.0 4.46e-01 94.2% 72.9%
4012257 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 47.0 4.55e-01 100.0% 64.9%
3907754 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 50.0 5.47e-01 100.0% 96.5%
3289386 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 47.0 5.08e-01 100.0% 85.2%
4957055 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.66 35.0 4.03e-01 94.2% 70.7%
3252847 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 48.0 5.20e-01 99.0% 92.9%
3296674 2.1.1.130 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 0.65 51.0 5.06e-01 100.0% 79.1%
3250428 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 47.0 4.23e-01 99.0% 54.5%
3279764 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 43.0 4.99e-01 99.0% 100.0%
5032255 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 37.0 4.38e-01 93.2% 84.3%
3197575 2.1.1.1 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 0.63 42.0 4.49e-01 89.3% 77.8%
3994138 2.3.1.0 beta barrels › OB-fold › TIMP-like › TIMP-like 0.63 55.0 4.70e-01 100.0% 60.0%
152653 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.63 47.0 5.00e-01 100.0% 91.1%
3285635 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 47.0 4.95e-01 100.0% 86.3%
3393168 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 45.0 4.46e-01 100.0% 70.0%
3961460 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 45.0 4.01e-01 100.0% 52.7%
4982481 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 46.0 4.82e-01 100.0% 85.3%
4958552 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 40.0 3.89e-01 100.0% 58.3%
3955464 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 45.0 4.77e-01 100.0% 87.8%
3334339 2484.1.1.157 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 0.61 42.0 3.16e-01 95.1% 29.0%
3262463 2.1.1.76 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.60 47.0 4.23e-01 100.0% 60.7%
3374948 2.1.1.130 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 0.60 48.0 4.92e-01 100.0% 88.0%
3443030 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.60 38.0 4.27e-01 96.1% 82.5%
2541776 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.60 49.0 4.84e-01 100.0% 84.4%
3582952 2.1.1.76 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.60 46.0 4.11e-01 100.0% 57.9%
3681671 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.60 34.0 3.02e-01 95.1% 38.7%
3882652 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 47.0 4.39e-01 100.0% 67.7%
5076488 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 45.0 4.65e-01 100.0% 85.0%
3808110 2.1.1.130 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 0.59 50.0 4.44e-01 100.0% 64.0%
3612666 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 49.0 4.60e-01 100.0% 73.8%
3595489 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.58 34.0 4.20e-01 74.8% 98.3%
3275994 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.58 50.0 4.65e-01 100.0% 75.0%
4680392 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.57 47.0 4.68e-01 100.0% 85.5%
4956351 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 51.0 3.30e-01 100.0% 27.3%
3255112 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.57 47.0 4.52e-01 100.0% 80.0%
4232994 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.56 47.0 4.67e-01 100.0% 85.5%
5032193 2.26.1.1 beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 0.56 52.0 5.15e-01 99.0% 97.2%
3818341 331.9.1.4 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Coatomer_g_Cpla 0.56 31.0 3.46e-01 90.3% 69.2%
3791987 2.1.1.25 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_pol_B_exo1 0.56 46.0 4.46e-01 100.0% 80.9%
4355655 264.2.1.0 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.55 47.0 4.38e-01 91.3% 74.4%
3550844 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.55 47.0 4.12e-01 96.1% 75.0%
3698360 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.55 47.0 4.02e-01 96.1% 72.9%
3894481 277.1.1.5 a+b two layers › PX domain › PX domain › PX domain › Vps5 0.54 46.0 3.18e-01 94.2% 34.6%
4124146 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.54 47.0 4.11e-01 96.1% 81.9%
4456679 3234.1.1.2 a+b two layers › GerBC protein › GerBC protein › GerBC protein › Spore_GerAC, Spore_GerAC_N 0.54 39.0 2.84e-01 75.7% 53.5%
3483729 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.54 46.0 4.45e-01 96.1% 98.3%
3903091 277.1.1.0 a+b two layers › PX domain › PX domain › PX domain 0.54 46.0 3.15e-01 96.1% 31.8%
3841771 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.54 46.0 4.10e-01 96.1% 82.7%
3643907 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.53 45.0 3.97e-01 95.1% 75.6%
3564807 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.53 45.0 4.02e-01 96.1% 78.7%
4022461 2.1.1.52 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Stn1 0.53 47.0 3.81e-01 100.0% 61.5%
4030635 1.1.7.2 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L3 0.53 44.0 3.30e-01 90.3% 84.4%
3183690 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 35.0 3.17e-01 78.6% 47.3%
4072295 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.53 45.0 3.05e-01 95.1% 32.7%
4529819 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.53 39.0 3.57e-01 77.7% 85.2%
3402459 223.2.1.4 a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.52 40.0 3.27e-01 80.6% 60.0%
3636081 4972.1.1.1 beta barrels › barrel domain in CV3147-like proteins › barrel domain in CV3147-like proteins › barrel domain in CV3147-like proteins › DUF917_C 0.52 44.0 3.92e-01 93.2% 86.9%
4017051 9.13.1.4 beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3237 0.52 41.0 3.73e-01 84.5% 87.9%
4012805 277.1.1.0 a+b two layers › PX domain › PX domain › PX domain 0.52 45.0 4.18e-01 96.1% 90.0%
1594263 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.52 45.0 3.24e-01 98.1% 90.6%
1930750 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.52 44.0 3.87e-01 95.1% 80.0%
4972474 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.51 46.0 2.80e-01 100.0% 24.1%
3662669 2.1.1.76 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.51 45.0 4.01e-01 100.0% 73.3%
3180376 109.3.1.11 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_5 0.50 43.0 2.86e-01 95.1% 27.1%