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MH707436.1__AYJ75214.1__BSP36_127__00127
Bact-VirMH707436.1__AYJ75214.1__BSP36_127__00127
Identity
- Accession:
- MH707436 ↗
- Kingdom:
- phage
Quality
92.0
mean pLDDT
Taxonomy
TaxID: 2301659
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 4-53_107-117
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3mi6B03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.66 | 47.0 | 3.90e-01 | 75.4% | 76.9% |
| 2cklB01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.64 | 44.0 | 4.19e-01 | 72.1% | 73.2% |
| 1wjvA01 | 3.30.1490.490 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.62 | 42.0 | 4.54e-01 | 86.9% | 86.3% |
| 3kfvA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 46.0 | 3.99e-01 | 83.6% | 100.0% |
| 3ihpA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.61 | 43.0 | 3.53e-01 | 90.2% | 39.7% |
| 1m0wB05 | 3.30.1490.50 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Glutathione synthase lid domain | 0.60 | 43.0 | 4.36e-01 | 77.0% | 80.0% |
| 3jyuB01 | 3.30.2230.10 | Alpha Beta › 2-Layer Sandwich › DUSP-like › DUSP-like | 0.59 | 44.0 | 3.50e-01 | 80.3% | 86.6% |
| 2idaA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.59 | 43.0 | 3.82e-01 | 88.5% | 54.5% |
| 2xrcA02 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.58 | 36.0 | 3.88e-01 | 80.3% | 79.2% |
| 1p16B02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 45.0 | 3.49e-01 | 86.9% | 63.2% |
| 1sb7A02 | 3.30.2340.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › TruD, insertion domain | 0.56 | 47.0 | 3.70e-01 | 95.1% | 63.2% |
| 1vs0A02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.55 | 38.0 | 3.24e-01 | 93.4% | 41.8% |
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 39.0 | 3.38e-01 | 77.0% | 66.7% |
| 1kl7A01 | 3.90.1380.10 | Alpha Beta › Alpha-Beta Complex › threonine synthase, domain 1, chain A › Threonine synthase, N-terminal domain | 0.53 | 33.0 | 2.92e-01 | 80.3% | 38.7% |
| 3vk6A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 37.0 | 3.81e-01 | 78.7% | 83.1% |
| 6ryvA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 42.0 | 4.19e-01 | 98.4% | 96.9% |
| 3pfsB00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 41.0 | 3.31e-01 | 91.8% | 73.8% |
| 5jtwA03 | 2.60.40.1940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 40.0 | 3.43e-01 | 100.0% | 88.2% |
| 4pz7A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 44.0 | 3.42e-01 | 100.0% | 65.0% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4316811 | 12.1.1.27 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_36C | 0.67 | 48.0 | 4.09e-01 | 75.4% | 77.9% |
| 3192330 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.64 | 43.0 | 3.88e-01 | 86.9% | 49.4% |
| 3816489 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.62 | 44.0 | 4.23e-01 | 75.4% | 80.0% |
| 3234037 | 4.1.1.25 ↗ | beta barrels › SH3 › SH3 › SH3 › PAZ | 0.59 | 43.0 | 3.49e-01 | 78.7% | 90.0% |
| 3556368 | 4309.1.1.1 ↗ | a+b complex topology › DUSP, domain in ubiquitin-specific proteases › DUSP, domain in ubiquitin-specific proteases › DUSP, domain in ubiquitin-specific proteases › DUSP | 0.59 | 44.0 | 3.48e-01 | 80.3% | 84.6% |
| 3785583 | 4.1.1.25 ↗ | beta barrels › SH3 › SH3 › SH3 › PAZ | 0.58 | 42.0 | 3.45e-01 | 78.7% | 88.3% |
| 3924850 | 4.1.1.25 ↗ | beta barrels › SH3 › SH3 › SH3 › PAZ | 0.57 | 40.0 | 3.25e-01 | 75.4% | 94.4% |
| 3388241 | 1056.1.1.0 ↗ | a+b two layers › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain | 0.56 | 46.0 | 3.49e-01 | 98.4% | 68.2% |
| 4086080 | 1056.1.1.1 ↗ | a+b two layers › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › TruD | 0.56 | 45.0 | 3.52e-01 | 96.7% | 57.4% |
| 3941032 | 10.12.1.9 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › JmjC | 0.56 | 48.0 | 2.97e-01 | 98.4% | 27.8% |
| 3393461 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.55 | 44.0 | 3.69e-01 | 100.0% | 84.8% |
| 4028284 | 327.11.2.11 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1_3 | 0.54 | 40.0 | 3.28e-01 | 83.6% | 96.9% |
| 3536995 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.54 | 39.0 | 4.02e-01 | 86.9% | 81.7% |
| 4237725 | 1056.1.1.1 ↗ | a+b two layers › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › TruD | 0.54 | 44.0 | 3.54e-01 | 98.4% | 60.7% |
| 4077806 | 1056.1.1.1 ↗ | a+b two layers › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › TruD | 0.54 | 44.0 | 3.18e-01 | 98.4% | 43.4% |
| 4011222 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.53 | 38.0 | 3.87e-01 | 80.3% | 78.3% |
| 4135813 | 1056.1.1.1 ↗ | a+b two layers › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › TruD | 0.53 | 43.0 | 3.44e-01 | 96.7% | 59.3% |
| 4890082 | 375.1.1.18 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › SIR2 | 0.53 | 35.0 | 3.95e-01 | 98.4% | 100.0% |
| 4011420 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.53 | 42.0 | 2.89e-01 | 93.4% | 67.8% |
| 3853797 | 386.1.1.20 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met | 0.53 | 41.0 | 4.08e-01 | 88.5% | 81.5% |
| 5018145 | 1.1.2.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › MacB_PCD | 0.53 | 39.0 | 3.30e-01 | 83.6% | 72.2% |
| 5060332 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.52 | 40.0 | 3.31e-01 | 90.2% | 70.8% |
| 4206445 | 2003.1.4.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 | 0.52 | 43.0 | 2.91e-01 | 96.7% | 40.9% |
| 3183646 | 376.1.1.61 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 | 0.52 | 41.0 | 3.71e-01 | 86.9% | 67.5% |
| 5075786 | 2003.1.4.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 | 0.51 | 44.0 | 2.90e-01 | 98.4% | 42.9% |
| 3712580 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.51 | 42.0 | 3.65e-01 | 96.7% | 58.0% |
| 3818309 | 4.1.1.25 ↗ | beta barrels › SH3 › SH3 › SH3 › PAZ | 0.50 | 35.0 | 2.91e-01 | 77.0% | 100.0% |
D2
medium
residues 58-101
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rdcA00 | 1.10.287.800 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 | 0.63 | 48.0 | 3.47e-01 | 86.4% | 29.3% |
| 3hpcX00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.56 | 41.0 | 2.94e-01 | 86.4% | 26.5% |
| 4a17U01 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 37.0 | 3.23e-01 | 79.5% | 58.4% |
| 1f9cA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.51 | 39.0 | 3.08e-01 | 100.0% | 54.9% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4525886 | 109.4.1.1360 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CBF, NOC3p | 0.61 | 46.0 | 2.56e-01 | 86.4% | 6.6% |
| 3886622 | 192.29.1.57 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Ninjurin | 0.52 | 42.0 | 3.10e-01 | 95.5% | 95.6% |