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MH719082.1__AXY86065.1__X__00010

Bact-Vir

MH719082.1__AXY86065.1__X__00010

Identity

Accession:
MH719082 ↗
Kingdom:
phage

Quality

69.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Escherichia_phage_vB_EcoM_IME392

TaxID: 2301649

Cluster

View cluster (34 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 29-165
PDB
Domain cluster: rep: MT028491.1__QIG66049.1__phiOC_p407__00383__D25-155
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4h7wA00 3.90.1140.10 Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase 0.79 74.0 6.59e-01 100.0% 87.7%
1iuhA00 3.90.1140.10 Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase 0.74 68.0 6.15e-01 100.0% 82.5%
2vfkA00 3.90.1140.10 Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase 0.74 68.0 5.89e-01 100.0% 82.4%
4qakA00 3.90.1140.10 Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase 0.73 67.0 6.20e-01 100.0% 82.5%
1jh6A00 3.90.1140.10 Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase 0.72 66.0 6.02e-01 100.0% 77.9%
1vdxA00 3.90.1140.10 Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase 0.72 66.0 5.95e-01 100.0% 84.2%
2d4gA00 3.90.1140.10 Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase 0.68 62.0 5.84e-01 100.0% 85.0%
1wojA00 3.90.1740.10 Alpha Beta › Alpha-Beta Complex › 2',3'-cyclic nucleotide 3'-phosphodiesterase fold › 2',3'-cyclic nucleotide 3'-phosphodiesterase superfamily 0.67 62.0 5.34e-01 100.0% 93.3%
4nhxA02 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.55 40.0 3.35e-01 74.5% 67.2%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4025967 264.1.1.6 ↗ beta barrels › LigT-like › LigT-related › LigT-related › HVSL 0.77 71.0 5.74e-01 100.0% 90.4%
4020982 264.1.1.0 ↗ beta barrels › LigT-like › LigT-related › LigT-related 0.76 70.0 5.61e-01 100.0% 67.0%
3339513 264.1.1.9 ↗ beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 0.75 70.0 6.39e-01 100.0% 86.3%
4972958 264.1.1.1 ↗ beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase 0.75 69.0 6.23e-01 100.0% 84.2%
4956981 264.1.1.1 ↗ beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase 0.75 69.0 6.20e-01 100.0% 82.7%
3738455 264.1.1.7 ↗ beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS 0.75 68.0 6.05e-01 100.0% 85.1%
5029239 264.1.1.1 ↗ beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase 0.74 69.0 6.27e-01 100.0% 82.0%
4994515 264.1.1.9 ↗ beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 0.74 69.0 6.24e-01 100.0% 86.7%
None — 0.74 68.0 6.32e-01 99.3% 90.0%
4982807 264.1.1.7 ↗ beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS 0.74 68.0 6.14e-01 100.0% 84.3%
3270425 264.1.1.6 ↗ beta barrels › LigT-like › LigT-related › LigT-related › HVSL 0.74 68.0 6.01e-01 100.0% 88.2%
277 264.1.1.1 ↗ beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase 0.74 68.0 6.15e-01 100.0% 82.5%
4937535 264.1.1.1 ↗ beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase 0.74 68.0 6.23e-01 100.0% 84.6%
4952280 264.1.1.1 ↗ beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase 0.74 68.0 6.15e-01 100.0% 83.9%
5039548 264.1.1.1 ↗ beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase 0.73 67.0 6.15e-01 100.0% 83.8%
5047137 264.1.1.1 ↗ beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase 0.73 67.0 6.08e-01 100.0% 82.7%
5061864 264.1.1.9 ↗ beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 0.73 67.0 6.08e-01 100.0% 84.3%
4967857 264.1.1.1 ↗ beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase 0.73 67.0 6.13e-01 100.0% 86.1%
3216833 264.1.1.7 ↗ beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS 0.73 67.0 5.71e-01 100.0% 85.8%
4972305 264.1.1.7 ↗ beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS 0.73 67.0 6.15e-01 100.0% 83.1%
None — 0.73 67.0 6.04e-01 100.0% 83.7%
4965442 264.1.1.9 ↗ beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 0.73 67.0 6.35e-01 100.0% 89.4%
4453123 264.1.1.1 ↗ beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase 0.73 66.0 6.05e-01 100.0% 85.0%
5030633 264.1.1.1 ↗ beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase 0.72 66.0 5.96e-01 100.0% 83.0%
4932664 264.1.1.7 ↗ beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS 0.72 66.0 6.01e-01 100.0% 83.1%
None — 0.72 66.0 6.01e-01 100.0% 83.9%
3995136 264.1.1.7 ↗ beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS 0.72 55.0 5.40e-01 80.3% 92.0%
None — 0.72 66.0 5.95e-01 100.0% 84.2%
5063905 264.1.1.9 ↗ beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 0.72 66.0 6.16e-01 100.0% 85.2%
4942504 264.1.1.1 ↗ beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase 0.72 65.0 5.94e-01 100.0% 84.2%
3616225 264.1.1.7 ↗ beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS 0.72 66.0 5.58e-01 100.0% 77.7%
5028063 264.1.1.9 ↗ beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 0.72 66.0 6.06e-01 100.0% 82.9%
4930187 264.1.1.1 ↗ beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase 0.71 65.0 5.87e-01 100.0% 84.0%
1953031 264.1.1.9 ↗ beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 0.71 65.0 6.02e-01 100.0% 81.7%
5055911 264.1.1.1 ↗ beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase 0.71 65.0 5.96e-01 100.0% 83.8%
5067404 264.1.1.9 ↗ beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 0.71 65.0 5.90e-01 100.0% 83.7%
3531648 264.1.1.7 ↗ beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS 0.71 65.0 5.94e-01 100.0% 83.9%
5010662 264.1.1.9 ↗ beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 0.70 63.0 5.75e-01 100.0% 84.9%
4991838 264.1.1.9 ↗ beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 0.70 57.0 5.77e-01 85.4% 90.2%
4957217 264.1.1.1 ↗ beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase 0.69 64.0 5.81e-01 100.0% 83.9%
3735878 264.1.1.7 ↗ beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS 0.69 63.0 5.61e-01 100.0% 79.5%
5062926 264.1.1.9 ↗ beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 0.69 63.0 5.93e-01 100.0% 82.4%
4968059 264.1.1.9 ↗ beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 0.69 62.0 5.71e-01 100.0% 85.0%
5058094 264.1.1.1 ↗ beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase 0.69 63.0 5.78e-01 100.0% 85.1%
4046553 264.1.1.9 ↗ beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 0.68 62.0 5.81e-01 100.0% 83.5%
None — 0.68 62.0 5.81e-01 100.0% 84.0%
4031839 264.1.1.9 ↗ beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 0.68 62.0 5.76e-01 100.0% 84.6%
5051264 264.1.1.9 ↗ beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 0.65 58.0 5.42e-01 100.0% 84.0%
5022722 304.156.1.0 ↗ a+b two layers › Alpha-beta plaits › DNA translocase FtsK N-terminal domain › DNA translocase FtsK N-terminal domain 0.63 27.0 3.49e-01 90.5% 68.0%
4355655 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.52 42.0 4.37e-01 100.0% 93.6%