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MH727545.1__AYB68999.1__SEA_DISMALSTRESSOR_44__00044
Bact-VirMH727545.1__AYB68999.1__SEA_DISMALSTRESSOR_44__00044
Identity
- Accession:
- MH727545 ↗
- Kingdom:
- phage
Quality
88.1
mean pLDDT
Taxonomy
TaxID: 2301610
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-84
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2x6hA03 | 1.10.1070.11 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain | 0.67 | 52.0 | 3.89e-01 | 84.4% | 92.5% |
| 3ez0C00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.64 | 58.0 | 4.19e-01 | 100.0% | 55.3% |
| 1w53A00 | 1.10.1240.30 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › KaiA/RbsU domain | 0.61 | 48.0 | 4.68e-01 | 90.9% | 78.6% |
| 6f1eA01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.61 | 41.0 | 3.39e-01 | 71.4% | 38.1% |
| 3f2eA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 40.0 | 3.92e-01 | 70.1% | 67.5% |
| 2pbiA02 | 1.10.1240.60 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.58 | 41.0 | 3.78e-01 | 74.0% | 57.4% |
| 1q6aA00 | 1.10.1240.30 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › KaiA/RbsU domain | 0.58 | 50.0 | 4.55e-01 | 98.7% | 73.8% |
| 1m5iA00 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.58 | 38.0 | 3.42e-01 | 83.1% | 48.6% |
| 2paqA00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.57 | 47.0 | 3.70e-01 | 94.8% | 65.5% |
| 2f07B00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 47.0 | 3.55e-01 | 93.5% | 79.1% |
| 1su0B00 | 3.90.1010.10 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.56 | 39.0 | 3.31e-01 | 72.7% | 72.8% |
| 3ztaA00 | 1.10.490.130 | Mainly Alpha › Orthogonal Bundle › Globin-like › | 0.56 | 48.0 | 4.09e-01 | 100.0% | 70.5% |
| 4kb2A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.55 | 43.0 | 3.81e-01 | 83.1% | 68.8% |
| 2kzcA00 | 1.10.790.20 | Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Domain of unknown function DUF1476 | 0.54 | 40.0 | 3.89e-01 | 80.5% | 70.6% |
| 4i9oA00 | 1.10.246.20 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Coactivator CBP, KIX domain | 0.54 | 32.0 | 3.28e-01 | 81.8% | 57.7% |
| 4akrA01 | 3.30.1140.60 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › F-actin capping protein, alpha subunit | 0.54 | 45.0 | 4.17e-01 | 98.7% | 91.5% |
| 2b5dX01 | 3.20.110.10 | Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain | 0.54 | 45.0 | 2.89e-01 | 96.1% | 96.0% |
| 4btfA01 | 1.20.930.20 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Adaptor protein Cbl, N-terminal domain | 0.52 | 36.0 | 3.30e-01 | 71.4% | 77.0% |
| 1cy5A00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.51 | 36.0 | 3.47e-01 | 94.8% | 63.0% |
| 6vxcA01 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.51 | 44.0 | 2.57e-01 | 100.0% | 54.8% |
| 2b0hA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.50 | 40.0 | 3.37e-01 | 90.9% | 50.8% |
| 3beeA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.50 | 44.0 | 4.21e-01 | 100.0% | 98.9% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3276646 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.67 | 38.0 | 3.10e-01 | 74.0% | 30.7% |
| 3202189 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.65 | 45.0 | 4.41e-01 | 84.4% | 64.7% |
| 5045487 | 4163.1.1.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 | 0.65 | 44.0 | 3.70e-01 | 93.5% | 42.4% |
| 4062553 | 509.1.1.10 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › HHD_RTEL1 | 0.63 | 40.0 | 3.82e-01 | 75.3% | 55.6% |
| 3587798 | 138.1.1.0 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain | 0.60 | 52.0 | 4.84e-01 | 97.4% | 99.0% |
| 3503526 | 4207.1.2.0 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region | 0.60 | 51.0 | 5.07e-01 | 97.4% | 90.0% |
| 3600361 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.60 | 39.0 | 3.59e-01 | 75.3% | 52.6% |
| 5048239 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.60 | 40.0 | 3.51e-01 | 80.5% | 46.1% |
| 3322575 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.59 | 46.0 | 3.14e-01 | 84.4% | 59.3% |
| 3250598 | 633.6.1.2 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX | 0.57 | 42.0 | 3.28e-01 | 96.1% | 36.1% |
| 3456370 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.57 | 39.0 | 3.04e-01 | 75.3% | 34.8% |
| 3888673 | 603.1.1.121 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF30821 | 0.55 | 42.0 | 3.60e-01 | 83.1% | 81.6% |
| 3298596 | 5050.1.1.33 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_5 | 0.54 | 45.0 | 3.92e-01 | 94.8% | 61.6% |
| 3402084 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.53 | 39.0 | 3.84e-01 | 80.5% | 72.9% |
| 4212920 | 3651.1.1.1 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B | 0.52 | 44.0 | 3.66e-01 | 93.5% | 57.0% |
| 3852543 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.51 | 38.0 | 3.39e-01 | 79.2% | 61.8% |
| 5028533 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.51 | 36.0 | 3.03e-01 | 74.0% | 92.3% |
| 3743077 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.51 | 45.0 | 3.84e-01 | 100.0% | 80.8% |