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MH729379.1__AXY81144.1__AVP_28__00028
Bact-VirMH729379.1__AXY81144.1__AVP_28__00028
Identity
- Accession:
- MH729379 ↗
- Kingdom:
- phage
Quality
95.5
mean pLDDT
Taxonomy
TaxID: 2495576
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 82-146
Domain cluster:
rep: OQ198718.1__WEY17603.1__X__00085__D59-146
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1d0dA00 | 4.10.410.10 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain | 0.63 | 40.0 | 4.13e-01 | 78.5% | 70.0% |
| 1tocR02 | 4.10.410.10 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain | 0.60 | 46.0 | 4.83e-01 | 86.2% | 93.1% |
| 5ja1B00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.59 | 40.0 | 4.02e-01 | 70.8% | 72.7% |
| 5yv7A00 | 4.10.410.10 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain | 0.59 | 46.0 | 4.75e-01 | 83.1% | 93.3% |
| 6q61A00 | 4.10.410.10 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain | 0.58 | 45.0 | 4.68e-01 | 83.1% | 96.6% |
| 2pstX00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.58 | 41.0 | 4.26e-01 | 76.9% | 86.9% |
| 4bd9B01 | 4.10.410.10 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain | 0.57 | 43.0 | 4.65e-01 | 80.0% | 98.1% |
| 5u55A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 38.0 | 3.21e-01 | 70.8% | 75.4% |
| 1bikA00 | 4.10.410.10 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain | 0.57 | 46.0 | 3.85e-01 | 87.7% | 51.8% |
| 1aalB00 | 4.10.410.10 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain | 0.57 | 45.0 | 4.82e-01 | 86.2% | 98.2% |
| 1bunB00 | 4.10.410.10 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain | 0.57 | 47.0 | 4.83e-01 | 90.8% | 96.7% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 38.0 | 3.92e-01 | 75.4% | 90.6% |
| 5hmaA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.55 | 37.0 | 3.33e-01 | 73.8% | 68.3% |
| 2d5mA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 41.0 | 3.05e-01 | 84.6% | 51.9% |
| 3bpkA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 40.0 | 3.03e-01 | 84.6% | 53.1% |
| 1zxuA00 | 2.40.160.200 | Mainly Beta › Beta Barrel › Porin › LURP1-related | 0.52 | 42.0 | 3.20e-01 | 89.2% | 90.1% |
| 4z85A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 39.0 | 2.88e-01 | 84.6% | 46.7% |
| 2diqA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 35.0 | 3.15e-01 | 72.3% | 65.0% |
| 3ffjA04 | 2.60.40.4040 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 38.0 | 3.23e-01 | 87.7% | 56.7% |
| 2e7zA01 | 2.20.25.90 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ADC-like domains | 0.51 | 35.0 | 3.71e-01 | 86.2% | 87.7% |
| 2imlA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.50 | 39.0 | 3.35e-01 | 89.2% | 74.3% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3718969 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.71 | 55.0 | 4.12e-01 | 87.7% | 94.9% |
| 3717986 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.68 | 56.0 | 4.75e-01 | 93.8% | 90.4% |
| 3993545 | 384.1.1.1 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › Kunitz_BPTI | 0.67 | 47.0 | 4.89e-01 | 73.8% | 90.0% |
| 3608011 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 53.0 | 4.39e-01 | 90.8% | 100.0% |
| 3924546 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.64 | 43.0 | 3.44e-01 | 87.7% | 34.6% |
| 3932350 | 384.1.1.1 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › Kunitz_BPTI | 0.64 | 45.0 | 3.90e-01 | 76.9% | 48.0% |
| 3797215 | 384.1.1.1 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › Kunitz_BPTI | 0.63 | 47.0 | 4.76e-01 | 80.0% | 100.0% |
| 3801275 | 384.1.1.1 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › Kunitz_BPTI | 0.61 | 47.0 | 4.62e-01 | 81.5% | 91.4% |
| 3503140 | 384.1.1.1 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › Kunitz_BPTI | 0.61 | 47.0 | 5.07e-01 | 81.5% | 100.0% |
| 3409813 | 384.1.1.1 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › Kunitz_BPTI | 0.61 | 46.0 | 4.99e-01 | 80.0% | 100.0% |
| 3214804 | 384.1.1.1 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › Kunitz_BPTI | 0.61 | 46.0 | 4.68e-01 | 81.5% | 98.5% |
| 3214809 | 384.1.1.1 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › Kunitz_BPTI | 0.60 | 44.0 | 4.64e-01 | 78.5% | 100.0% |
| 3402124 | 384.1.1.0 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like | 0.60 | 45.0 | 4.98e-01 | 86.2% | 100.0% |
| 3214785 | 384.1.1.1 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › Kunitz_BPTI | 0.59 | 49.0 | 4.95e-01 | 89.2% | 96.9% |
| 1886098 | 4076.2.1.1 ↗ | a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like › MbtH | 0.59 | 40.0 | 4.02e-01 | 70.8% | 72.7% |
| 3242462 | 387.1.7.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Evasin-3 knottin scaffold | 0.59 | 51.0 | 4.10e-01 | 95.4% | 80.0% |
| 3213485 | 384.1.1.1 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › Kunitz_BPTI | 0.59 | 45.0 | 4.11e-01 | 81.5% | 69.4% |
| 3487001 | 384.1.1.0 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like | 0.59 | 36.0 | 4.14e-01 | 75.4% | 100.0% |
| 3595833 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.59 | 46.0 | 4.16e-01 | 89.2% | 96.8% |
| 3401622 | 384.1.1.0 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like | 0.59 | 48.0 | 4.89e-01 | 89.2% | 96.9% |
| 4001182 | 384.1.1.1 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › Kunitz_BPTI | 0.58 | 48.0 | 5.01e-01 | 89.2% | 98.3% |
| 3485207 | 384.1.1.1 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › Kunitz_BPTI | 0.58 | 45.0 | 4.28e-01 | 81.5% | 76.0% |
| 1175478 | 4076.2.1.1 ↗ | a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like › MbtH | 0.56 | 41.0 | 3.97e-01 | 78.5% | 69.4% |
| 3220305 | 384.1.1.1 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › Kunitz_BPTI | 0.56 | 43.0 | 3.49e-01 | 81.5% | 45.8% |
| 3905698 | 384.1.1.1 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › Kunitz_BPTI | 0.55 | 44.0 | 4.60e-01 | 87.7% | 96.7% |
| 3928418 | 3785.1.1.1 ↗ | a+b three layers › Suppressor of Fused, C-terminal domain › Suppressor of Fused, C-terminal domain › Suppressor of Fused, C-terminal domain › SARA_C | 0.54 | 37.0 | 2.96e-01 | 73.8% | 71.4% |
| 3680728 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 38.0 | 3.76e-01 | 90.8% | 72.0% |
| 5006014 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.52 | 40.0 | 3.36e-01 | 89.2% | 74.6% |
| 3279119 | 4090.1.1.0 ↗ | a+b two layers › BH3703-like › BH3703-like › BH3703-like | 0.50 | 42.0 | 3.44e-01 | 100.0% | 68.9% |
D2
medium
residues 1-81
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1sb7A02 | 3.30.2340.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › TruD, insertion domain | 0.62 | 45.0 | 3.82e-01 | 77.8% | 94.1% |
| 4bpuC00 | 3.90.920.10 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain | 0.53 | 36.0 | 2.41e-01 | 71.6% | 79.3% |
| 3ddcB00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 37.0 | 3.22e-01 | 75.3% | 64.7% |
| 4nlcA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 36.0 | 2.58e-01 | 74.1% | 52.7% |
| 3gasB02 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.50 | 35.0 | 2.84e-01 | 72.8% | 54.2% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3394204 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.63 | 29.0 | 3.49e-01 | 77.8% | 64.8% |
| 3830041 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.59 | 45.0 | 3.91e-01 | 84.0% | 95.4% |
| 4268493 | 379.1.1.3 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_2 | 0.58 | 26.0 | 3.37e-01 | 77.8% | 73.3% |
| 3998938 | 6110.1.1.1 ↗ | alpha superhelices › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › DHC_N2 | 0.57 | 39.0 | 2.39e-01 | 70.4% | 36.1% |
| 4221282 | 7533.1.1.1 ↗ | a/b three-layered sandwiches › Phosphoglycerate kinase domain 2 › Phosphoglycerate kinase domain 2 › Phosphoglycerate kinase domain 2 › PGK | 0.55 | 42.0 | 3.10e-01 | 82.7% | 63.9% |
| 4942265 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 26.0 | 2.60e-01 | 76.5% | 43.5% |
| 3586126 | 221.1.1.76 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_2 | 0.54 | 39.0 | 3.43e-01 | 76.5% | 84.0% |
| 3783976 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.52 | 41.0 | 4.02e-01 | 85.2% | 80.0% |
| 4033043 | 616.1.1.41 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › Terminase_4 | 0.52 | 33.0 | 3.19e-01 | 84.0% | 57.8% |
| 4987009 | 3837.1.1.1 ↗ | alpha bundles › Uncharacterized conserved protein Dip1984 › Uncharacterized conserved protein Dip1984 › Uncharacterized conserved protein Dip1984 › DUF6847 | 0.51 | 40.0 | 3.30e-01 | 100.0% | 46.0% |
| 4023956 | 3871.1.1.1 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN | 0.51 | 37.0 | 3.14e-01 | 85.2% | 47.7% |
| 3398695 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.50 | 36.0 | 2.72e-01 | 74.1% | 51.0% |
| 4025072 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.50 | 40.0 | 3.58e-01 | 86.4% | 60.9% |