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MH729379.1__AXY81160.1__AVP_44__00044

Bact-Vir

MH729379.1__AXY81160.1__AVP_44__00044

Identity

Accession:
MH729379 ↗
Kingdom:
phage

Quality

82.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Aerococcus_phage_vB_AviM_AVP

TaxID: 2495576

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 56-114
PDB
Domain cluster: representative
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1y4cA03 1.20.120.660 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain 0.89 62.0 4.90e-01 72.9% 39.8%
2yevA02 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.80 57.0 5.27e-01 74.6% 63.5%
2y4tA02 1.10.287.110 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain 0.79 52.0 5.48e-01 74.6% 76.9%
4nb5B02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.78 55.0 5.42e-01 74.6% 93.8%
3fd9A03 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.77 54.0 5.10e-01 74.6% 72.6%
2qkdA02 2.60.120.1040 Mainly Beta › Sandwich › Jelly Rolls › ZPR1, A/B domain 0.77 54.0 4.09e-01 74.6% 33.6%
4rngC00 1.20.1280.290 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.77 54.0 4.85e-01 74.6% 54.2%
4c91A03 1.20.58.2150 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.76 67.0 4.62e-01 94.9% 61.5%
2n1rA00 1.10.150.90 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Immunodeficiency lentiviruses, gag gene matrix protein p17 0.75 52.0 4.03e-01 74.6% 35.1%
2nr4A02 1.20.58.290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. 0.74 50.0 5.08e-01 71.2% 75.9%
2mtqA00 1.20.58.130 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.72 51.0 4.76e-01 74.6% 64.4%
1xg2B00 1.20.140.40 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein 0.72 56.0 4.10e-01 83.1% 53.0%
3llkA01 1.20.120.1960 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › QSOX sulfhydryl oxidase domain 0.72 48.0 4.06e-01 76.3% 41.8%
2c5iT00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 48.0 4.21e-01 72.9% 54.3%
2kw6A00 6.10.140.1300 Special › Helix non-globular › Helix Hairpins › 0.69 53.0 5.21e-01 86.4% 84.6%
3lmfA00 1.20.1270.360 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.69 58.0 4.78e-01 94.9% 65.1%
5h41A01 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.68 63.0 3.68e-01 100.0% 28.2%
4mu9B00 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.67 52.0 3.23e-01 86.4% 46.0%
2yfaB01 1.20.1440.210 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.67 58.0 4.58e-01 94.9% 61.3%
1xzpA02 1.20.120.430 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2 0.67 57.0 4.08e-01 93.2% 46.4%
2p7vA00 1.20.120.1370 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Regulator of RNA polymerase sigma(70) subunit, domain 4 0.66 54.0 4.18e-01 100.0% 46.4%
2a2cA03 1.20.1440.340 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.65 51.0 3.92e-01 86.4% 72.5%
2di3B02 1.20.120.530 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like 0.65 54.0 4.13e-01 100.0% 72.3%
4yjwA00 1.20.120.930 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF12889, N-terminal DUF3829 0.64 54.0 4.07e-01 96.6% 57.5%
2bvlA01 1.20.58.1190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.63 53.0 4.72e-01 94.9% 69.8%
3wiwA00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.62 52.0 3.25e-01 98.3% 45.6%
1y74A00 1.10.287.650 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › L27 domain 0.61 42.0 4.32e-01 74.6% 78.9%
3thxB03 1.10.1420.10 Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › 0.61 49.0 3.66e-01 100.0% 33.2%
3b0pA02 1.20.120.1460 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.60 43.0 4.11e-01 79.7% 97.3%
3ed5A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.60 41.0 3.68e-01 79.7% 50.0%
1x42A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.59 43.0 3.87e-01 79.7% 54.2%
2nn4A00 1.10.287.760 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like 0.59 40.0 4.04e-01 79.7% 71.0%
3mxtA02 3.30.1300.10 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain 0.58 46.0 3.96e-01 89.8% 94.0%
4o53A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.57 44.0 2.91e-01 81.4% 36.7%
1o5xA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 42.0 2.84e-01 84.7% 35.4%
3eoeD01 3.40.1380.20 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain 0.54 43.0 3.32e-01 86.4% 80.3%
4aq4A02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.52 45.0 3.08e-01 98.3% 51.9%
4f91B04 1.10.3380.10 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › Sec63 N-terminal domain-like domain 0.50 42.0 3.31e-01 100.0% 43.0%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4962483 5069.1.1.0 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes 0.88 63.0 4.17e-01 74.6% 22.9%
3304429 604.9.1.0 ↗ alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 0.88 60.0 5.81e-01 71.2% 69.2%
3725456 604.3.1.24 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › PF27980 0.87 62.0 5.42e-01 74.6% 54.1%
3432510 616.1.1.0 ↗ alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain 0.84 58.0 5.63e-01 71.2% 69.2%
5019369 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.83 62.0 3.77e-01 78.0% 23.7%
5028461 632.7.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.83 59.0 5.07e-01 74.6% 52.2%
5023828 159.1.1.1 ↗ alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 › MazG 0.82 58.0 5.05e-01 74.6% 51.1%
4243775 604.3.1.0 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.81 57.0 5.17e-01 74.6% 57.5%
4988832 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.78 54.0 5.30e-01 72.9% 67.7%
4998043 633.29.1.13 ↗ alpha bundles › Bromodomain-like › Putative uncharacterized protein PAV1-137 › Putative uncharacterized protein PAV1-137 › DUF2096_N 0.77 54.0 4.51e-01 74.6% 46.0%
5024540 2498.1.1.0 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.75 63.0 4.73e-01 93.2% 39.3%
1164229 605.1.1.4 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3 0.75 53.0 5.16e-01 74.6% 71.2%
5047825 109.4.1.198 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 0.69 61.0 3.87e-01 98.3% 26.3%
3507936 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.69 64.0 4.45e-01 100.0% 41.1%
3973458 611.4.1.2 ↗ alpha bundles › N-cbl like › PG0775 C-terminal domain-like › PG0775 C-terminal domain-like › Acyl-CoA_dh_C 0.69 52.0 4.12e-01 84.7% 82.3%
3995271 109.1.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C 0.67 56.0 4.61e-01 96.6% 50.4%
3318512 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.67 50.0 3.80e-01 81.4% 48.6%
4586614 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.66 47.0 4.70e-01 74.6% 75.0%
3599828 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 59.0 3.61e-01 98.3% 29.6%
4263407 5059.1.1.1 ↗ alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA 0.65 54.0 3.45e-01 94.9% 91.3%
3601054 109.4.1.257 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PDS5 0.65 55.0 2.97e-01 93.2% 11.1%
3271267 568.1.1.0 ↗ few secondary structure elements › p8-MTCP1-related › p8-MTCP1-related › p8-MTCP1-related 0.61 52.0 5.25e-01 100.0% 98.3%
5069616 601.4.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains 0.61 55.0 4.84e-01 100.0% 69.4%
4999265 601.3.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain 0.60 51.0 4.64e-01 98.3% 75.0%
3417070 3826.1.1.0 ↗ alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) 0.58 50.0 4.83e-01 100.0% 91.4%
3516130 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.57 48.0 3.77e-01 100.0% 60.7%
3703647 568.1.1.0 ↗ few secondary structure elements › p8-MTCP1-related › p8-MTCP1-related › p8-MTCP1-related 0.56 44.0 4.50e-01 96.6% 96.4%
4088578 101.35.1.0 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.56 40.0 3.90e-01 74.6% 73.8%
1758636 138.1.1.8 ↗ alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › Gp44_C 0.55 47.0 4.07e-01 93.2% 62.9%
4677445 109.2.1.54 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Ribophorin_II 0.55 45.0 3.00e-01 98.3% 48.8%
4935180 198.1.1.0 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.53 41.0 3.42e-01 81.4% 54.0%
3884336 4957.1.1.0 ↗ a+b complex topology › helical domain in yeast RNA-polymerases › third helical domain in yeast RNA-polymerase II beta-prime subunit › third helical domain in yeast RNA-polymerase II beta-prime subunit 0.53 44.0 3.43e-01 100.0% 76.7%
D2 medium residues 115-262
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04973.18 best NMN_transporter 45.5 1.20e-11 97.3% 73.6%
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3r84A00 1.10.287.3490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.83 37.0 5.10e-01 77.0% 80.2%
6r1nA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.77 37.0 4.41e-01 77.0% 67.0%
1vx7301 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.72 34.0 4.78e-01 92.6% 91.9%
6h9xA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.71 32.0 3.83e-01 77.0% 60.8%
4abmD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.71 35.0 4.87e-01 77.0% 93.5%
6iknD01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.70 33.0 2.71e-01 77.0% 25.1%
2ondA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.70 46.0 3.61e-01 70.3% 31.8%
2mtqA00 1.20.58.130 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.69 35.0 4.81e-01 95.3% 98.6%
1w99A01 1.20.190.10 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain 0.68 50.0 4.75e-01 75.7% 75.1%
4xpwA00 1.20.120.50 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like 0.68 45.0 4.74e-01 93.2% 74.8%
3gw4A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.66 44.0 4.04e-01 98.0% 52.1%
3qo8A01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.66 35.0 4.17e-01 76.4% 74.5%
4gpkF02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.65 43.0 3.68e-01 98.0% 40.8%
3favD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.64 33.0 4.47e-01 76.4% 94.9%
5figA00 1.20.1270.360 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.64 40.0 4.69e-01 89.9% 91.0%
2dq0A01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.63 36.0 4.19e-01 77.7% 77.6%
3lmfA00 1.20.1270.360 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.63 41.0 4.70e-01 91.9% 89.0%
1xzpA02 1.20.120.430 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2 0.62 43.0 4.15e-01 100.0% 62.0%
2fo7A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.61 36.0 3.74e-01 93.9% 61.8%
4dwlA00 1.20.1440.60 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence 0.60 41.0 4.70e-01 92.6% 95.4%
7tj4A01 1.25.40.1040 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.59 35.0 3.79e-01 98.0% 70.0%
1ya0A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.57 45.0 4.04e-01 98.0% 59.2%
1s2xA00 1.20.190.30 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › CAG pathogenicity island protein, CagZ 0.57 41.0 3.91e-01 75.0% 96.7%
7qihA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.56 34.0 3.99e-01 100.0% 87.1%
3lssA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.56 37.0 4.31e-01 75.0% 89.3%
2l1lB00 1.20.1440.250 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.56 36.0 3.85e-01 84.5% 74.8%
4doyA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.54 41.0 3.88e-01 80.4% 92.3%
3c5iA02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.54 49.0 3.98e-01 97.3% 98.1%
2uxwA01 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.54 41.0 3.80e-01 78.4% 75.8%
2vzbB00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.54 49.0 4.76e-01 100.0% 86.8%
2pftA00 1.20.1280.170 Mainly Alpha › Up-down Bundle › Monooxygenase › Exocyst complex component Exo70 0.53 45.0 3.15e-01 92.6% 32.0%
4flbA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.52 36.0 3.83e-01 92.6% 79.4%
7ccmB01 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.52 36.0 3.69e-01 83.1% 72.7%
4akgA04 1.20.58.1120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dynein motor heavy chain, linker domain, subdomain 4 0.52 36.0 3.55e-01 97.3% 65.4%
8hk0B03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.52 40.0 4.15e-01 80.4% 94.9%
1e7pC00 1.20.1300.10 Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit 0.52 46.0 3.94e-01 100.0% 85.8%
6tqfA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.52 38.0 2.86e-01 75.7% 91.0%
5m9dA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.52 37.0 3.88e-01 93.2% 79.7%
5hb0D01 1.20.120.1880 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleoporin, helical C-terminal domain 0.50 37.0 3.18e-01 96.6% 45.4%
4rfsS00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.50 43.0 4.01e-01 92.6% 87.2%
2clbA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.50 44.0 4.36e-01 96.6% 89.3%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3839146 6155.2.1.1 ↗ alpha duplicates or obligate multimers › TOG superfamily › PnuC › PnuC › NMN_transporter 0.88 83.0 7.10e-01 100.0% 66.4%
3590837 6155.2.1.1 ↗ alpha duplicates or obligate multimers › TOG superfamily › PnuC › PnuC › NMN_transporter 0.88 84.0 6.94e-01 100.0% 61.7%
3989269 6155.2.1.1 ↗ alpha duplicates or obligate multimers › TOG superfamily › PnuC › PnuC › NMN_transporter 0.87 81.0 6.85e-01 100.0% 63.6%
3972200 6155.2.1.1 ↗ alpha duplicates or obligate multimers › TOG superfamily › PnuC › PnuC › NMN_transporter 0.83 75.0 6.91e-01 99.3% 75.7%
4483958 6155.2.1.1 ↗ alpha duplicates or obligate multimers › TOG superfamily › PnuC › PnuC › NMN_transporter 0.81 75.0 6.34e-01 100.0% 63.9%
4878766 1075.4.1.9 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_tran+ABC_membrane 0.75 35.0 3.79e-01 79.1% 52.0%
3605667 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.74 47.0 4.29e-01 73.0% 50.3%
5026525 633.7.1.0 ↗ alpha bundles › Bromodomain-like › Bacillus cereus metalloprotein-like › Bacillus cereus metalloprotein-like 0.72 42.0 5.08e-01 92.6% 87.8%
3705915 3615.1.1.0 ↗ alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain 0.71 50.0 5.54e-01 96.6% 89.2%
3707921 633.21.1.0 ↗ alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 0.69 40.0 4.58e-01 96.6% 76.4%
3309583 604.12.1.65 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT_ATG1 0.69 38.0 5.02e-01 95.9% 100.0%
3568113 174.1.1.14 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › NKAIN 0.67 46.0 5.02e-01 96.6% 84.2%
4547648 4177.1.1.0 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.65 30.0 2.73e-01 77.0% 30.2%
4211332 633.10.1.35 ↗ alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like › NKAIN 0.64 45.0 4.98e-01 95.9% 88.3%
3513588 174.1.1.14 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › NKAIN 0.64 43.0 4.89e-01 89.9% 90.9%
5076762 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 45.0 4.75e-01 97.3% 80.8%
3290299 109.4.1.497 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › EccD 0.63 45.0 3.50e-01 73.6% 35.9%
3932372 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.63 44.0 4.59e-01 95.9% 76.4%
3534501 3755.3.1.293 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › TBCA_PH 0.63 34.0 3.44e-01 79.1% 52.0%
3412554 174.1.1.1 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin 0.62 45.0 4.89e-01 95.3% 89.6%
4957270 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.62 42.0 4.37e-01 93.9% 74.8%
3268971 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 43.0 4.07e-01 98.0% 60.0%
3255663 633.21.1.0 ↗ alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 0.61 42.0 4.91e-01 73.0% 99.0%
3580491 174.1.1.1 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin 0.60 46.0 4.56e-01 80.4% 87.5%
5022006 109.4.1.192 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 0.60 47.0 4.28e-01 93.9% 62.1%
3407613 174.1.1.1 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin 0.60 46.0 4.83e-01 95.3% 87.0%
3642502 109.4.1.1171 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm_PDR 0.60 41.0 4.63e-01 99.3% 93.6%
5014600 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 41.0 4.48e-01 91.9% 84.0%
3577620 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.59 41.0 4.63e-01 100.0% 91.3%
3232098 174.1.1.13 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › DUF2700 0.59 43.0 4.58e-01 93.2% 86.2%
3939354 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.59 43.0 4.43e-01 95.3% 79.3%
5064195 5076.2.1.0 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ 0.59 30.0 2.97e-01 75.0% 44.4%
3178532 109.4.1.1764 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28917 0.58 53.0 4.51e-01 100.0% 66.9%
3389617 174.1.1.29 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › DUF4728 0.58 44.0 4.71e-01 94.6% 90.0%
3483038 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.58 42.0 4.55e-01 94.6% 88.8%
3513364 174.1.1.1 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin 0.58 47.0 4.73e-01 94.6% 84.7%
4546061 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.58 45.0 4.77e-01 95.9% 90.4%
4992667 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.57 41.0 3.31e-01 73.0% 66.2%
5018765 109.4.1.198 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 0.57 43.0 4.06e-01 97.3% 63.2%
3492394 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.57 47.0 4.81e-01 93.2% 91.4%
3762118 633.21.1.23 ↗ alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CD20 0.57 44.0 4.29e-01 81.1% 97.0%
3575213 109.4.1.649 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF4807 0.57 43.0 4.42e-01 100.0% 82.9%
3520105 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.57 44.0 4.35e-01 80.4% 91.0%
3383516 174.1.1.1 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin 0.56 43.0 4.55e-01 95.9% 90.0%
3616727 603.1.1.98 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE, Syntaxin_2 0.56 41.0 3.66e-01 75.7% 80.0%
3908020 633.21.1.0 ↗ alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 0.55 42.0 4.42e-01 79.7% 88.1%
3505296 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 48.0 4.27e-01 95.3% 80.0%
3714080 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 39.0 3.41e-01 76.4% 48.0%
4881792 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.54 47.0 4.83e-01 95.9% 96.6%
3247352 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.54 41.0 4.38e-01 79.7% 92.8%
3832977 109.4.1.1475 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF27629 0.54 43.0 3.68e-01 100.0% 51.8%
3587778 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.53 44.0 4.31e-01 90.5% 93.9%
3220199 174.1.1.1 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin 0.51 44.0 4.39e-01 93.9% 89.7%
4991905 3684.1.1.0 ↗ alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like 0.50 47.0 3.72e-01 100.0% 64.9%
3731612 2004.1.1.567 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_23 0.50 37.0 2.31e-01 77.0% 15.6%