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MH744418.1__AYD81170.1__SEA_JUSTBECAUSE_1__00001

Bact-Vir

MH744418.1__AYD81170.1__SEA_JUSTBECAUSE_1__00001

Identity

Accession:
MH744418 ↗
Kingdom:
phage

Quality

71.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Streptomyces_phage_JustBecause

TaxID: 2315618

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-56
PDB
Domain cluster: representative
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2od1A00 6.10.140.2220 Special › Helix non-globular › Helix Hairpins › 0.71 45.0 4.75e-01 82.1% 72.0%
3hctA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.69 47.0 3.85e-01 87.5% 38.5%
6xi7B02 3.30.60.20 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.66 40.0 4.43e-01 75.0% 84.6%
2y43A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.65 45.0 3.95e-01 87.5% 46.6%
5eyaF00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.65 44.0 4.03e-01 87.5% 51.3%
5dinA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.65 43.0 3.44e-01 85.7% 32.5%
1y8fA00 3.30.60.20 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.64 43.0 4.53e-01 82.1% 78.4%
3lrqB00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.62 46.0 4.12e-01 87.5% 56.2%
1tbnA00 3.30.60.20 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.61 40.0 3.85e-01 76.8% 57.6%
2xzmZ00 3.30.1230.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › Ribosomal protein S21 0.56 45.0 3.84e-01 91.1% 68.0%
2ecjA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.55 41.0 4.10e-01 83.9% 79.3%
4hi8B00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.55 45.0 4.27e-01 98.2% 88.9%
4bbqA01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.54 38.0 3.60e-01 76.8% 60.0%
2dloA00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.54 42.0 3.75e-01 87.5% 65.4%
1v87A01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.54 41.0 3.61e-01 83.9% 64.7%
4qf3A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.52 36.0 3.62e-01 82.1% 73.7%
3purA01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.52 36.0 3.39e-01 76.8% 93.2%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3409921 377.9.1.1 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-MYND 0.81 49.0 5.14e-01 80.4% 68.0%
3800970 377.9.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like 0.74 43.0 5.03e-01 80.4% 82.5%
3894271 377.9.1.2 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-HIT 0.73 49.0 5.11e-01 85.7% 76.0%
3405764 377.9.1.9 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › MYND_ZMYND11_ZMYD8 0.73 43.0 4.99e-01 80.4% 82.5%
8219 377.9.1.1 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-MYND 0.72 49.0 5.24e-01 85.7% 83.0%
3886848 377.9.1.1 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-MYND 0.70 54.0 5.47e-01 85.7% 83.6%
3878134 377.1.1.16 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS 0.70 58.0 5.87e-01 92.9% 92.7%
164734 377.9.1.1 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-MYND 0.69 45.0 4.77e-01 82.1% 76.0%
4938674 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.68 52.0 5.15e-01 82.1% 86.7%
3194530 376.1.1.37 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › SLX1_C 0.66 52.0 4.11e-01 96.4% 40.8%
3921605 377.9.1.9 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › MYND_ZMYND11_ZMYD8 0.65 44.0 3.49e-01 85.7% 33.0%
3915745 376.1.1.119 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › PF26037 0.64 45.0 4.74e-01 78.6% 86.0%
3311213 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.63 51.0 4.62e-01 89.3% 66.7%
3633240 70.3.1.11 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like › SET, zf-MYND 0.63 53.0 3.35e-01 94.6% 31.1%
4975289 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.62 46.0 4.57e-01 83.9% 75.0%
3847944 376.1.1.29 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_4 0.62 42.0 3.88e-01 89.3% 52.0%
3492870 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.61 46.0 4.71e-01 82.1% 85.5%
3825851 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.60 46.0 4.31e-01 83.9% 78.6%
4011161 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.60 46.0 4.34e-01 89.3% 70.0%
4022391 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.59 44.0 3.82e-01 82.1% 66.7%
3531583 376.1.1.75 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Pellino_RING 0.59 45.0 4.13e-01 83.9% 82.7%
3309791 376.1.2.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.58 38.0 4.08e-01 78.6% 82.2%
3313611 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.56 38.0 4.22e-01 75.0% 100.0%
4025222 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.56 43.0 3.73e-01 89.3% 53.3%
3596999 376.1.2.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.56 40.0 4.22e-01 85.7% 100.0%
3373702 376.1.2.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.55 40.0 4.30e-01 85.7% 100.0%
3525956 386.1.1.133 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2+zf-C2H2_4 0.54 37.0 3.57e-01 76.8% 61.5%
4012099 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.54 42.0 3.80e-01 87.5% 61.3%
3237227 376.1.1.103 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_Vps41 0.53 41.0 3.92e-01 87.5% 71.4%
3317581 376.1.2.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.53 38.0 3.65e-01 85.7% 64.6%
3791965 386.1.1.1 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.52 38.0 3.44e-01 80.4% 55.7%
4015777 376.1.6.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain 0.50 36.0 3.70e-01 92.9% 87.3%