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MH744418.1__AYD81184.1__SEA_JUSTBECAUSE_15__00015

Bact-Vir

MH744418.1__AYD81184.1__SEA_JUSTBECAUSE_15__00015

Identity

Accession:
MH744418 ↗
Kingdom:
phage

Quality

93.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Streptomyces_phage_JustBecause

TaxID: 2315618

Cluster

View cluster (14 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-73
PDB
Domain cluster: rep: SR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00127__D21-122
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5cw7B00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.80 72.0 6.58e-01 100.0% 88.3%
7bwfA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.78 70.0 6.57e-01 100.0% 93.1%
2otrA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.78 70.0 6.50e-01 100.0% 91.1%
3bpqD00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.75 66.0 6.23e-01 98.6% 88.4%
4ml0B00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.75 67.0 6.21e-01 100.0% 90.0%
4mcxF00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.72 63.0 5.88e-01 100.0% 97.8%
2i2lA01 2.10.70.50 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.68 37.0 4.32e-01 91.7% 75.0%
3hi2B00 3.30.2310.40 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › 0.68 60.0 5.47e-01 100.0% 79.4%
4zovB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.66 42.0 2.67e-01 100.0% 12.6%
3jamg01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 43.0 2.78e-01 100.0% 16.5%
3dueA00 3.40.1420.30 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › 0.61 39.0 3.23e-01 100.0% 37.0%
4o9dA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 43.0 2.67e-01 100.0% 13.6%
4ec6A00 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 53.0 4.65e-01 100.0% 87.2%
3it5G00 2.70.70.10 Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) 0.57 39.0 3.02e-01 72.2% 71.1%
1olzA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 50.0 3.06e-01 100.0% 92.0%
1idpA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 50.0 3.97e-01 100.0% 87.1%
1a2pA00 3.10.450.30 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Microbial ribonucleases 0.56 38.0 3.34e-01 100.0% 47.2%
3vpbE00 2.20.28.160 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.56 36.0 3.94e-01 100.0% 83.9%
3kztA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 47.0 3.95e-01 100.0% 62.9%
4l8oA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 46.0 3.56e-01 100.0% 70.7%
3hzpA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 46.0 3.82e-01 100.0% 85.8%
6t5kC00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.52 35.0 2.52e-01 94.4% 22.3%
1uhvA01 2.60.40.1500 Mainly Beta › Sandwich › Immunoglobulin-like › Glycosyl hydrolase domain; family 39 0.51 30.0 2.43e-01 72.2% 25.0%
2b5lB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 44.0 2.72e-01 94.4% 88.5%
6bm0A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 43.0 2.73e-01 100.0% 18.5%
ECOD (44)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4950220 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.87 81.0 7.46e-01 100.0% 87.8%
4937462 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.87 81.0 7.26e-01 100.0% 88.4%
4938029 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.87 80.0 7.15e-01 100.0% 83.7%
4999510 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.87 80.0 7.54e-01 100.0% 89.4%
4948982 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.87 80.0 7.38e-01 100.0% 88.9%
4941220 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.86 79.0 7.67e-01 100.0% 91.3%
4928181 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.86 80.0 7.49e-01 100.0% 85.9%
5071213 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.85 78.0 7.50e-01 100.0% 93.8%
5080427 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.85 78.0 7.56e-01 100.0% 91.3%
5063859 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.84 77.0 7.45e-01 100.0% 93.8%
5014619 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.84 77.0 7.46e-01 100.0% 92.5%
4968774 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.84 75.0 7.46e-01 98.6% 97.3%
5080337 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.83 76.0 7.08e-01 100.0% 85.4%
3166135 4312.1.1.4 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 0.83 76.0 6.91e-01 100.0% 78.9%
4646165 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.83 76.0 7.00e-01 100.0% 91.1%
4966674 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.83 75.0 7.11e-01 100.0% 87.1%
5030204 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.82 75.0 7.39e-01 100.0% 96.0%
1877168 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.80 72.0 6.63e-01 100.0% 90.2%
5029836 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.80 72.0 6.95e-01 100.0% 90.0%
2060430 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.79 72.0 6.96e-01 100.0% 93.7%
2629016 4312.1.1.6 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › YoeB_toxin 0.78 70.0 6.57e-01 100.0% 93.1%
166546 4312.1.1.10 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › YafQ_toxin 0.78 70.0 6.50e-01 100.0% 91.1%
1297412 4312.1.1.10 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › YafQ_toxin 0.75 67.0 6.19e-01 100.0% 90.1%
169853 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.75 65.0 6.22e-01 98.6% 88.2%
3605532 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.72 42.0 2.65e-01 100.0% 12.0%
5081030 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.71 65.0 6.43e-01 100.0% 96.0%
3742766 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.70 43.0 2.75e-01 100.0% 13.6%
3790212 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.68 43.0 2.94e-01 100.0% 19.2%
3474310 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.67 46.0 3.96e-01 70.8% 60.9%
4124150 5.1.3.154 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF30361 0.66 43.0 2.65e-01 100.0% 11.6%
3536857 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.65 52.0 3.94e-01 86.1% 69.7%
4653505 372.2.1.3 ↗ a+b complex topology › RNase A-like › EndoU-like › EndoU-like › EndoU_bacteria 0.64 55.0 4.54e-01 100.0% 89.3%
3435779 809.2.1.0 ↗ a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.64 39.0 4.42e-01 100.0% 81.8%
3288920 3735.1.1.0 ↗ beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein 0.58 45.0 2.68e-01 83.3% 18.7%
4960074 239.3.1.1 ↗ beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain › Fasciclin 0.55 46.0 3.90e-01 100.0% 95.5%
3215596 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.54 42.0 2.90e-01 83.3% 46.5%
3718321 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.54 40.0 2.47e-01 97.2% 11.7%
3613890 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 46.0 2.89e-01 100.0% 17.2%
3903857 5.1.4.12 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema 0.54 45.0 2.73e-01 90.3% 91.8%
4943316 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 47.0 3.31e-01 95.8% 99.5%
3276465 316.1.1.36 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central 0.53 37.0 2.76e-01 75.0% 82.0%
3526347 6129.1.1.1 ↗ beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.53 43.0 3.11e-01 97.2% 54.8%
3601122 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 45.0 2.70e-01 100.0% 13.9%
3601400 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.51 43.0 2.69e-01 100.0% 15.1%