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MH744418.1__AYD81234.1__SEA_JUSTBECAUSE_65__00065
Bact-VirMH744418.1__AYD81234.1__SEA_JUSTBECAUSE_65__00065
Identity
- Accession:
- MH744418 ↗
- Kingdom:
- phage
Quality
69.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 67-96_141-232
Domain cluster:
rep: OP947158.1__WBK39736.1__X__00020__D20-126
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 33.0 | 4.55e-01 | 83.6% | 76.2% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 31.0 | 4.18e-01 | 83.6% | 72.7% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 32.0 | 4.06e-01 | 86.1% | 69.4% |
| 2vqeL00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.71 | 38.0 | 3.87e-01 | 95.9% | 52.4% |
| 5gqoA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 37.0 | 4.12e-01 | 91.0% | 66.0% |
| 2cqaA01 | 2.40.50.360 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain | 0.68 | 37.0 | 4.57e-01 | 89.3% | 86.5% |
| 4gs3A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 38.0 | 4.36e-01 | 90.2% | 74.4% |
| 3nppA00 | 2.40.50.480 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Protein of unknown function DUF1093 | 0.66 | 34.0 | 3.94e-01 | 91.8% | 67.8% |
| 1x6oA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 37.0 | 4.44e-01 | 91.0% | 84.8% |
| 1dgsA04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 36.0 | 4.49e-01 | 87.7% | 89.0% |
| 1v1qA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 41.0 | 4.31e-01 | 91.0% | 70.0% |
| 5odnC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 38.0 | 4.13e-01 | 91.0% | 68.6% |
| 2qw7C00 | 2.40.50.220 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml | 0.63 | 33.0 | 3.71e-01 | 86.9% | 63.2% |
| 2h1eA02 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.63 | 30.0 | 4.26e-01 | 77.9% | 100.0% |
| 2cwaA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 37.0 | 3.96e-01 | 91.0% | 65.1% |
| 3f2bA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 39.0 | 4.35e-01 | 96.7% | 79.2% |
| 2vl6A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 40.0 | 4.19e-01 | 97.5% | 72.3% |
| 4z9cB00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.61 | 40.0 | 4.10e-01 | 91.0% | 69.6% |
| 3f1zI00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 42.0 | 4.29e-01 | 100.0% | 75.0% |
| 8aa9A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 39.0 | 4.00e-01 | 100.0% | 69.3% |
| 2k5vA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 37.0 | 4.01e-01 | 95.9% | 75.5% |
| 2vw9B00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 38.0 | 4.03e-01 | 91.0% | 74.3% |
| 1pfsA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 32.0 | 3.91e-01 | 90.2% | 84.6% |
| 1se8A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 37.0 | 3.84e-01 | 91.0% | 69.4% |
| 4pmwA04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 37.0 | 4.30e-01 | 89.3% | 87.9% |
| 3n8bA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 27.0 | 3.37e-01 | 78.7% | 70.7% |
| 1jb3A00 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 37.0 | 3.68e-01 | 91.0% | 62.2% |
| 1x6cA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.57 | 35.0 | 3.64e-01 | 81.1% | 63.6% |
| 2i4kA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.55 | 44.0 | 4.36e-01 | 86.1% | 97.7% |
| 2bn4B03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 47.0 | 4.33e-01 | 95.1% | 88.6% |
| 4bgjA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.54 | 45.0 | 4.62e-01 | 91.8% | 95.8% |
| 1jb7A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 48.0 | 4.31e-01 | 100.0% | 79.9% |
| 1gd5A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.52 | 45.0 | 4.45e-01 | 93.4% | 96.9% |
| 4ikbA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.52 | 41.0 | 4.11e-01 | 86.1% | 98.4% |
| 1h6hA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.51 | 44.0 | 4.22e-01 | 94.3% | 85.3% |
| 4kz1A00 | 3.10.450.230 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein | 0.51 | 31.0 | 3.06e-01 | 72.1% | 54.8% |
| 5bkaE01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 31.0 | 3.10e-01 | 89.3% | 56.8% |
| 1fvzA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.50 | 39.0 | 3.10e-01 | 83.6% | 88.1% |
| 2g8sB00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.50 | 37.0 | 2.74e-01 | 76.2% | 89.0% |
ECOD (61)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3876051 | 2.1.1.44 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 | 0.76 | 41.0 | 4.92e-01 | 93.4% | 76.5% |
| 3775920 | 2.1.1.44 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 | 0.76 | 41.0 | 4.14e-01 | 93.4% | 52.0% |
| 3969377 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.76 | 39.0 | 4.93e-01 | 91.0% | 82.4% |
| 3374948 | 2.1.1.130 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 | 0.73 | 39.0 | 4.32e-01 | 90.2% | 64.0% |
| 3279764 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.72 | 39.0 | 4.98e-01 | 88.5% | 91.4% |
| 143390 | 2.24.1.1 ↗ | beta barrels › OB-fold › probable receptor YhhM › probable receptor YhhM › DUF2500 | 0.72 | 39.0 | 4.71e-01 | 91.0% | 82.9% |
| 4932581 | 2.1.1.12 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S28e | 0.71 | 38.0 | 4.94e-01 | 94.3% | 95.4% |
| 3250428 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 42.0 | 4.01e-01 | 91.0% | 49.7% |
| 3252847 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 42.0 | 4.97e-01 | 91.0% | 84.7% |
| 3296674 | 2.1.1.130 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 | 0.71 | 44.0 | 4.60e-01 | 99.2% | 68.2% |
| 3282644 | 2.24.1.2 ↗ | beta barrels › OB-fold › probable receptor YhhM › probable receptor YhhM › DUF7489 | 0.71 | 36.0 | 4.66e-01 | 89.3% | 89.2% |
| 3297966 | 4.25.1.2 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD | 0.71 | 39.0 | 3.94e-01 | 72.1% | 54.2% |
| 4680169 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.70 | 42.0 | 4.47e-01 | 100.0% | 67.6% |
| 4642580 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 41.0 | 4.44e-01 | 100.0% | 67.6% |
| 3384331 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 41.0 | 4.82e-01 | 99.2% | 83.5% |
| 3590786 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.70 | 41.0 | 4.36e-01 | 100.0% | 64.5% |
| 4032340 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.69 | 41.0 | 4.41e-01 | 96.7% | 67.6% |
| 4001702 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 45.0 | 4.70e-01 | 100.0% | 71.3% |
| 3602923 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 38.0 | 4.13e-01 | 100.0% | 65.0% |
| 4102465 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 41.0 | 4.36e-01 | 97.5% | 68.3% |
| 3593900 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 40.0 | 4.71e-01 | 91.0% | 83.5% |
| 4032678 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.68 | 40.0 | 4.35e-01 | 100.0% | 70.0% |
| 3811669 | 2.1.1.130 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 | 0.68 | 42.0 | 4.43e-01 | 99.2% | 68.2% |
| 3314558 | 2.1.1.130 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 | 0.68 | 42.0 | 3.99e-01 | 100.0% | 52.1% |
| 4091312 | 2.1.1.26 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB | 0.68 | 37.0 | 4.38e-01 | 89.3% | 76.5% |
| 4238204 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.68 | 41.0 | 4.41e-01 | 96.7% | 69.5% |
| 3994138 | 2.3.1.0 ↗ | beta barrels › OB-fold › TIMP-like › TIMP-like | 0.67 | 44.0 | 4.01e-01 | 92.6% | 50.6% |
| 3791987 | 2.1.1.25 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_pol_B_exo1 | 0.67 | 45.0 | 4.66e-01 | 100.0% | 73.0% |
| 3945427 | 2.1.1.26 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB | 0.67 | 38.0 | 4.45e-01 | 92.6% | 80.0% |
| 4278743 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.66 | 40.0 | 4.26e-01 | 96.7% | 66.4% |
| 3255870 | 2.1.1.26 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB | 0.66 | 37.0 | 4.00e-01 | 90.2% | 63.8% |
| 4058606 | 2.1.1.26 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB | 0.66 | 37.0 | 4.27e-01 | 90.2% | 75.6% |
| 5074611 | 2.26.1.1 ↗ | beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 | 0.65 | 39.0 | 4.67e-01 | 87.7% | 90.0% |
| 4958552 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 36.0 | 3.71e-01 | 86.9% | 56.5% |
| 3497521 | 2.3.1.0 ↗ | beta barrels › OB-fold › TIMP-like › TIMP-like | 0.65 | 40.0 | 3.96e-01 | 91.0% | 57.7% |
| 3743730 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 25.0 | 3.12e-01 | 100.0% | 54.7% |
| 4285674 | 2.1.1.26 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB | 0.65 | 38.0 | 4.30e-01 | 91.8% | 76.7% |
| 1954221 | 2.26.1.1 ↗ | beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 | 0.64 | 37.0 | 4.54e-01 | 88.5% | 92.0% |
| 4547854 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 40.0 | 4.21e-01 | 100.0% | 69.1% |
| 4929168 | 2.3.1.0 ↗ | beta barrels › OB-fold › TIMP-like › TIMP-like | 0.64 | 39.0 | 4.01e-01 | 91.0% | 62.5% |
| 4188650 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.64 | 39.0 | 4.21e-01 | 100.0% | 70.5% |
| 3712657 | 2.1.1.135 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3592 | 0.64 | 37.0 | 3.58e-01 | 91.0% | 50.7% |
| 4193996 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.63 | 43.0 | 4.50e-01 | 97.5% | 76.4% |
| 3612666 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 42.0 | 4.16e-01 | 100.0% | 63.1% |
| 3808110 | 2.1.1.130 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 | 0.63 | 42.0 | 3.95e-01 | 99.2% | 55.3% |
| 5050059 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 40.0 | 4.12e-01 | 99.2% | 67.0% |
| 4477850 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.63 | 39.0 | 4.25e-01 | 100.0% | 75.0% |
| 5042375 | 2.26.1.1 ↗ | beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 | 0.62 | 36.0 | 4.40e-01 | 87.7% | 92.0% |
| 3705888 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 42.0 | 4.35e-01 | 99.2% | 73.9% |
| 3610968 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 40.0 | 4.38e-01 | 89.3% | 80.0% |
| 4937878 | 2.3.1.0 ↗ | beta barrels › OB-fold › TIMP-like › TIMP-like | 0.61 | 37.0 | 4.28e-01 | 91.8% | 85.9% |
| 4181914 | 2.1.1.16 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind | 0.59 | 39.0 | 3.78e-01 | 91.0% | 60.0% |
| 3691681 | 2.1.1.25 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_pol_B_exo1 | 0.57 | 43.0 | 4.20e-01 | 100.0% | 73.8% |
| 3499053 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.57 | 42.0 | 4.09e-01 | 99.2% | 69.6% |
| 3287503 | 2.3.1.0 ↗ | beta barrels › OB-fold › TIMP-like › TIMP-like | 0.56 | 37.0 | 3.59e-01 | 91.8% | 59.3% |
| 3813787 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 36.0 | 3.74e-01 | 85.2% | 70.2% |
| 4470749 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.55 | 46.0 | 4.46e-01 | 97.5% | 81.5% |
| 3926984 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.55 | 37.0 | 3.16e-01 | 80.3% | 42.0% |
| 4956007 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.54 | 36.0 | 3.83e-01 | 97.5% | 78.1% |
| 3513396 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.52 | 42.0 | 3.72e-01 | 86.9% | 72.8% |
| 4563164 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.51 | 38.0 | 3.95e-01 | 100.0% | 83.5% |
D2
high
residues 234-319
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vb6A01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.55 | 32.0 | 3.77e-01 | 77.9% | 88.9% |
| 3e8lC00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.55 | 38.0 | 3.03e-01 | 70.9% | 86.4% |
| 1mhnA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 29.0 | 3.35e-01 | 75.6% | 81.4% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4966133 | 2.1.1.377 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF25948 | 0.51 | 43.0 | 3.36e-01 | 95.3% | 83.5% |
| 4478612 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.51 | 33.0 | 2.99e-01 | 80.2% | 47.5% |
| 3703423 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.50 | 40.0 | 3.52e-01 | 88.4% | 83.7% |
D3
high
residues 328-395
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2c61A00 | 3.40.50.12240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.79 | 45.0 | 2.66e-01 | 95.6% | 9.0% |
| 2e6nA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 53.0 | 4.51e-01 | 92.6% | 46.2% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 51.0 | 5.14e-01 | 94.1% | 68.1% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 52.0 | 5.07e-01 | 94.1% | 65.8% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 52.0 | 5.35e-01 | 94.1% | 74.2% |
| 3h8zA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 48.0 | 5.48e-01 | 95.6% | 100.0% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 50.0 | 5.34e-01 | 97.1% | 94.9% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 47.0 | 4.92e-01 | 94.1% | 83.9% |
| 2l89A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 51.0 | 4.31e-01 | 94.1% | 55.6% |
| 1h3zA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 50.0 | 4.25e-01 | 94.1% | 57.4% |
| 2yrvA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 49.0 | 4.12e-01 | 98.5% | 55.8% |
| 4gi3C00 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.57 | 31.0 | 3.42e-01 | 89.7% | 64.9% |
| 1khcA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 45.0 | 4.64e-01 | 95.6% | 92.3% |
| 1fc6A02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.56 | 44.0 | 4.06e-01 | 89.7% | 93.5% |
| 3wasA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 46.0 | 2.93e-01 | 100.0% | 39.6% |
| 2ybyA01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.55 | 43.0 | 4.39e-01 | 94.1% | 90.8% |
| 1vw4V00 | 6.20.130.10 | Special › Other non-globular › Ribosomal Protein L25; Chain P › | 0.53 | 28.0 | 2.92e-01 | 97.1% | 46.9% |
| 1jeyB02 | 2.40.290.10 | Mainly Beta › Beta Barrel › Ku70; Chain: A; Domain 2 › | 0.53 | 44.0 | 3.27e-01 | 97.1% | 83.1% |
| 1io1A02 | 2.170.280.10 | Mainly Beta › Beta Complex › f41 fragment of flagellin, middle domain › f41 fragment of flagellin, middle domain | 0.52 | 37.0 | 3.02e-01 | 75.0% | 47.3% |
| 4lduA03 | 2.30.30.1040 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 42.0 | 4.29e-01 | 92.6% | 95.6% |
| 1f39A00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.51 | 34.0 | 3.04e-01 | 95.6% | 45.5% |
| 2vfrA02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.51 | 33.0 | 2.75e-01 | 97.1% | 35.4% |
| 1wthD01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 42.0 | 3.74e-01 | 97.1% | 69.8% |
| 5amhA00 | 2.170.150.20 | Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › Peptide methionine sulfoxide reductase. | 0.50 | 39.0 | 3.45e-01 | 86.8% | 77.4% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 171891 | 4.1.1.110 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 | 0.70 | 49.0 | 5.30e-01 | 95.6% | 90.9% |
| 4573456 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.65 | 44.0 | 4.72e-01 | 95.6% | 84.5% |
| 5028192 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.63 | 48.0 | 4.84e-01 | 95.6% | 80.9% |
| 3593768 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 51.0 | 4.53e-01 | 92.6% | 62.1% |
| 3931055 | 4.1.1.311 ↗ | beta barrels › SH3 › SH3 › SH3 › BRWD_AD | 0.61 | 50.0 | 4.91e-01 | 92.6% | 81.3% |
| 4285300 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.60 | 50.0 | 4.56e-01 | 94.1% | 73.7% |
| 3424116 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.58 | 48.0 | 3.95e-01 | 94.1% | 50.8% |
| 4970425 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.57 | 44.0 | 4.50e-01 | 95.6% | 89.2% |
| 3630348 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.56 | 46.0 | 2.56e-01 | 91.2% | 11.6% |
| 3486621 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.55 | 43.0 | 4.08e-01 | 92.6% | 95.6% |
| 4976645 | 224.1.1.1 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF | 0.55 | 43.0 | 3.49e-01 | 85.3% | 62.5% |
| 5070036 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 40.0 | 3.10e-01 | 100.0% | 37.3% |
| 3816395 | 1.1.11.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › At2g31720-like | 0.51 | 44.0 | 3.44e-01 | 98.5% | 54.9% |
| 3462303 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.51 | 42.0 | 3.05e-01 | 100.0% | 31.2% |
| 3502140 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.50 | 42.0 | 2.90e-01 | 95.6% | 33.6% |
| 3656514 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.50 | 39.0 | 3.55e-01 | 94.1% | 62.1% |
| 3448534 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.50 | 41.0 | 3.50e-01 | 95.6% | 54.9% |
| 3646748 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.50 | 39.0 | 3.30e-01 | 97.1% | 49.2% |