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MH744418.1__AYD81282.1__SEA_JUSTBECAUSE_113__00113

Bact-Vir

MH744418.1__AYD81282.1__SEA_JUSTBECAUSE_113__00113

Identity

Accession:
MH744418 ↗
Kingdom:
phage

Quality

94.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Streptomyces_phage_JustBecause

TaxID: 2315618

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 37-94
PDB
Domain cluster: representative
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2i45D00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.63 44.0 3.70e-01 74.1% 85.9%
2h36X00 3.30.160.300 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.62 46.0 3.77e-01 87.9% 42.6%
5fgoA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 37.0 3.70e-01 74.1% 54.8%
2yj6A02 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.62 36.0 3.05e-01 72.4% 33.7%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.61 39.0 2.95e-01 79.3% 26.4%
1snzB00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.60 45.0 2.84e-01 82.8% 78.1%
3ikwA02 3.10.540.20 Alpha Beta › Roll › duf1285 like fold › 0.60 44.0 4.17e-01 87.9% 65.7%
3hn5A02 2.60.40.2060 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 47.0 3.76e-01 86.2% 96.5%
3d4eA01 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.59 42.0 3.73e-01 84.5% 52.4%
4feiA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 49.0 4.13e-01 94.8% 69.6%
6z9cA01 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.58 44.0 3.51e-01 84.5% 87.7%
3ff2A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 45.0 3.60e-01 86.2% 84.6%
6serA01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 49.0 3.34e-01 100.0% 71.1%
4ec7A00 2.10.90.10 Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines 0.57 41.0 3.40e-01 77.6% 56.5%
4fxtA02 2.60.40.2060 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 46.0 3.81e-01 91.4% 97.2%
3glaA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 45.0 3.94e-01 94.8% 77.3%
1w18A00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.56 46.0 2.77e-01 100.0% 85.6%
3w1zC00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 46.0 3.59e-01 94.8% 60.0%
3t1oA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 40.0 2.91e-01 82.8% 26.6%
3d4eA02 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.55 41.0 3.78e-01 84.5% 61.5%
4mlgG00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.55 44.0 2.86e-01 96.6% 86.4%
1w2wB00 3.40.50.10470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 0.54 43.0 3.10e-01 91.4% 78.0%
3f62A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 40.0 3.38e-01 82.8% 93.5%
3lygA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 41.0 3.35e-01 86.2% 77.5%
3aabB00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 45.0 3.73e-01 94.8% 68.9%
4wrnA02 2.60.40.3210 Mainly Beta › Sandwich › Immunoglobulin-like › Zona pellucida, ZP-N domain 0.54 42.0 3.49e-01 86.2% 90.5%
3d2lA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.54 38.0 3.74e-01 75.9% 73.0%
1shsA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 43.0 3.57e-01 94.8% 67.0%
3c7fA02 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.53 42.0 2.70e-01 94.8% 82.6%
1xweA01 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 42.0 3.22e-01 89.7% 53.8%
6ewnA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 43.0 3.71e-01 94.8% 75.8%
1wznA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.53 37.0 3.84e-01 75.9% 89.3%
4b08A01 2.40.50.730 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 41.0 3.72e-01 87.9% 85.2%
1uuzB00 3.40.1420.10 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme 0.52 40.0 3.18e-01 86.2% 46.1%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.52 38.0 3.65e-01 81.0% 76.8%
4a18O00 3.30.390.110 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.52 41.0 3.20e-01 89.7% 70.9%
2bolA03 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 41.0 3.67e-01 94.8% 59.1%
3ecrB03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.52 40.0 3.43e-01 87.9% 67.6%
1gteA04 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 39.0 2.94e-01 84.5% 64.1%
4ccvA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 40.0 3.29e-01 87.9% 67.0%
7bj4A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.51 43.0 2.69e-01 100.0% 22.8%
3d6xB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 40.0 3.05e-01 86.2% 92.1%
1kutB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 36.0 3.17e-01 75.9% 76.4%
1opoA02 2.60.40.1780 Mainly Beta › Sandwich › Immunoglobulin-like › Carmovirus coat protein 0.51 39.0 3.30e-01 86.2% 87.4%
1smvC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 35.0 2.44e-01 72.4% 89.6%
3vsfC01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.50 43.0 2.73e-01 100.0% 24.0%
4ydzA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 40.0 3.20e-01 93.1% 59.3%
7s5oA01 3.50.70.20 Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › Cytochrome P460 0.50 39.0 3.08e-01 89.7% 80.7%
8dqwG01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.50 42.0 3.12e-01 100.0% 38.9%
3nqnA00 3.30.530.70 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › Uncharacterised protein PF12723, DUF3809 0.50 41.0 3.10e-01 93.1% 96.7%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3866695 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.62 41.0 3.00e-01 81.0% 25.2%
3306218 220.1.1.4 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 0.62 52.0 4.00e-01 94.8% 64.4%
4611577 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.62 44.0 3.99e-01 75.9% 85.0%
4449302 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 43.0 3.55e-01 91.4% 41.9%
5012485 4.6.1.0 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.59 45.0 4.18e-01 84.5% 80.0%
3635930 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.59 46.0 3.44e-01 87.9% 83.9%
3903537 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.57 46.0 3.82e-01 94.8% 60.0%
3706182 3270.1.1.0 ↗ a+b two layers › a+b domain in heme oxygenase › a+b domain in heme oxygenase › a+b domain in heme oxygenase 0.57 48.0 4.04e-01 94.8% 69.0%
3581366 74.1.1.0 ↗ beta duplicates or obligate multimers › Transcription factor IIA (TFIIA), beta-barrel domain › Transcription factor IIA (TFIIA), beta-barrel domain › Transcription factor IIA (TFIIA), beta-barrel domain 0.57 44.0 2.59e-01 86.2% 10.4%
3223396 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 47.0 3.85e-01 96.6% 60.0%
3270768 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.56 46.0 3.86e-01 94.8% 69.5%
4498712 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.56 46.0 3.71e-01 94.8% 62.2%
2697168 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.55 45.0 3.81e-01 94.8% 70.5%
4021812 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.55 45.0 3.47e-01 94.8% 50.0%
5057515 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.55 37.0 3.73e-01 70.7% 68.3%
3926536 304.48.1.1 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.55 46.0 2.99e-01 91.4% 41.5%
3285280 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.54 45.0 3.53e-01 94.8% 56.2%
3470080 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.54 44.0 4.04e-01 93.1% 77.2%
3628210 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.54 44.0 3.98e-01 94.8% 75.3%
3281948 243.1.1.28 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.54 42.0 3.40e-01 87.9% 88.3%
4990210 283.2.1.8 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › PF29994 0.53 41.0 3.57e-01 86.2% 91.6%
4389823 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.53 44.0 3.42e-01 94.8% 52.6%
4575105 882.1.1.0 ↗ a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 0.53 40.0 3.07e-01 84.5% 38.7%
3380753 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.53 44.0 3.89e-01 94.8% 67.8%
4939339 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.53 44.0 3.37e-01 94.8% 51.7%
4092054 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.53 43.0 3.56e-01 94.8% 63.5%
3779283 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 41.0 3.34e-01 86.2% 85.2%
4988150 241.1.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.53 40.0 3.38e-01 84.5% 59.0%
3464766 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.52 43.0 3.37e-01 94.8% 51.9%
5076783 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.52 42.0 3.58e-01 94.8% 68.6%
4293664 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.52 41.0 3.22e-01 91.4% 43.7%
3486075 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.52 34.0 3.07e-01 74.1% 48.8%
3432354 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.51 42.0 3.55e-01 94.8% 68.6%
3844481 11.1.1.640 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ZP-N 0.51 39.0 3.19e-01 84.5% 85.5%
3288315 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.51 40.0 3.30e-01 94.8% 48.8%
5017141 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 38.0 3.14e-01 86.2% 85.0%
3738504 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.51 37.0 3.09e-01 84.5% 42.7%
3530658 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.51 39.0 3.31e-01 94.8% 47.0%
4205157 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.50 41.0 3.30e-01 94.8% 60.0%
3391461 3308.2.1.1 ↗ beta duplicates or obligate multimers › periplasmic lysozyme inhibitor of I-type lysozyme-like › XAC2610 protein › XAC2610 protein › 4_1_CTD 0.50 32.0 3.05e-01 77.6% 50.7%