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MH744418.1__AYD81292.1__SEA_JUSTBECAUSE_123__00123

Bact-Vir

MH744418.1__AYD81292.1__SEA_JUSTBECAUSE_123__00123

Identity

Accession:
MH744418 ↗
Kingdom:
phage

Quality

82.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-77
PDB
Domain cluster: representative
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3wa2X01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 51.0 4.88e-01 77.6% 80.5%
4hbrA00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 57.0 4.64e-01 90.8% 52.1%
2ffgA00 3.30.720.20 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 0.69 50.0 4.98e-01 82.9% 73.8%
7obmA01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.64 54.0 3.62e-01 96.1% 34.3%
2psoB02 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.64 48.0 3.69e-01 81.6% 95.5%
2wtzA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.63 46.0 3.26e-01 76.3% 33.8%
4u6bA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.63 52.0 3.39e-01 90.8% 48.7%
7ne4A01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.63 52.0 3.41e-01 90.8% 29.2%
2wzoA01 3.30.160.360 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.63 49.0 4.10e-01 85.5% 50.4%
3htrA00 2.30.30.240 Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain 0.62 48.0 4.48e-01 84.2% 80.6%
5jzjA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 45.0 4.21e-01 77.6% 97.9%
3c5mA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 51.0 3.24e-01 90.8% 31.1%
1uuzB00 3.40.1420.10 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme 0.61 50.0 4.19e-01 88.2% 85.2%
5c2vB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 52.0 3.37e-01 96.1% 38.6%
2xzhA00 2.130.10.110 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain 0.60 52.0 3.42e-01 100.0% 27.7%
1mruA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 43.0 4.03e-01 75.0% 100.0%
8aa0E01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.60 48.0 3.19e-01 86.8% 34.0%
4ozxA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.60 47.0 3.23e-01 86.8% 38.9%
4r8oA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.60 41.0 3.78e-01 71.1% 59.2%
2cn2A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 48.0 3.09e-01 89.5% 29.9%
3tdgA01 3.10.450.520 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 45.0 4.77e-01 86.8% 97.0%
1u9tA02 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.59 41.0 3.22e-01 73.7% 72.8%
6qk7A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 47.0 3.09e-01 88.2% 35.7%
2ecfA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.59 47.0 2.94e-01 86.8% 33.0%
1s1dA00 2.120.10.100 Mainly Beta › 6 Propeller › Neuraminidase › Apyrase 0.58 47.0 3.22e-01 92.1% 36.9%
3dasA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.58 46.0 3.07e-01 88.2% 42.5%
2fpnA01 3.30.2030.10 Alpha Beta › 2-Layer Sandwich › TBP-like › YwmB-like 0.58 42.0 3.51e-01 77.6% 44.3%
3fgqA01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.58 45.0 3.39e-01 82.9% 74.2%
2hzpA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.58 46.0 3.53e-01 85.5% 99.4%
2bkkA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 40.0 3.80e-01 72.4% 97.8%
4qqsB00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.58 44.0 3.04e-01 86.8% 36.4%
6serA01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 48.0 3.54e-01 98.7% 80.7%
2vd5B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 39.0 2.96e-01 71.1% 46.5%
2xglA00 3.10.450.300 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › YebF/Colicin-M immunity protein 0.57 45.0 4.25e-01 86.8% 81.3%
3wyfE00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 44.0 3.58e-01 84.2% 63.4%
1avwB00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.56 40.0 3.18e-01 76.3% 83.6%
3doaA01 2.30.310.10 Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain 0.55 47.0 3.84e-01 100.0% 77.8%
2mcfA00 3.40.50.11630 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 40.0 3.31e-01 81.6% 64.9%
4be3A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 46.0 3.12e-01 100.0% 51.6%
1ln1A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 44.0 3.32e-01 96.1% 94.1%
4ntqA00 3.10.380.20 Alpha Beta › Roll › Ribonuclease domain of colicin e3 (Residues 456-551) › Novel toxin 21 (CdiA), C-terminal domain 0.53 40.0 4.01e-01 82.9% 81.6%
1tltA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.52 36.0 2.82e-01 73.7% 34.4%
3stoA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.52 41.0 3.33e-01 86.8% 86.3%
3dbaA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.51 42.0 3.34e-01 94.7% 74.9%
4k15A00 2.60.40.3860 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 38.0 3.24e-01 85.5% 55.1%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4506585 222.1.1.12 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH 0.67 46.0 3.64e-01 71.1% 96.8%
3958429 222.1.1.1 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydratas 0.67 46.0 3.88e-01 71.1% 97.6%
3710426 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.64 46.0 4.14e-01 76.3% 55.2%
3892266 331.3.1.3 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.63 53.0 3.75e-01 94.7% 74.7%
3815659 223.2.1.1 a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.63 54.0 4.46e-01 100.0% 54.7%
4950455 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.62 51.0 5.30e-01 89.5% 100.0%
3802464 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.62 49.0 3.05e-01 85.5% 27.6%
1832896 5.1.3.31 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Pectate_lyase22 0.62 51.0 3.24e-01 90.8% 31.1%
3618350 5.1.4.14 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.61 50.0 3.24e-01 90.8% 34.9%
3928856 5.1.4.14 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.61 51.0 3.30e-01 92.1% 29.2%
4059013 5.1.4.481 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BNR, Sortilin-Vps10 0.61 50.0 2.81e-01 92.1% 11.7%
3917645 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 51.0 4.46e-01 96.1% 78.3%
3926131 331.3.1.3 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.61 49.0 3.53e-01 92.1% 76.5%
3396092 5.1.2.9 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Apyrase 0.61 46.0 3.11e-01 84.2% 26.2%
3624211 844.1.1.0 beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain 0.61 44.0 3.46e-01 77.6% 36.4%
3583021 5.1.4.14 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.60 50.0 3.20e-01 92.1% 32.6%
4939450 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.60 43.0 3.96e-01 75.0% 73.0%
3997807 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.60 41.0 3.27e-01 71.1% 55.6%
3679340 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.60 44.0 3.95e-01 78.9% 96.4%
3197622 4210.1.1.0 a+b two layers › WGR domain › WGR domain › WGR domain 0.60 46.0 4.15e-01 82.9% 79.0%
4944014 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 42.0 3.75e-01 75.0% 100.0%
3607434 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.60 46.0 3.90e-01 85.5% 60.0%
2387834 5.4.1.0 beta duplicates or obligate multimers › beta-propeller-like 0.60 50.0 3.99e-01 92.1% 65.4%
4357660 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 49.0 3.20e-01 92.1% 35.5%
3611951 331.3.1.3 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.59 49.0 3.60e-01 94.7% 89.8%
3333989 206.1.1.14 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › ABC1 0.59 48.0 3.02e-01 92.1% 46.2%
3630412 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.59 50.0 3.25e-01 97.4% 39.7%
3275758 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.59 48.0 2.96e-01 92.1% 24.8%
1153941 243.4.1.2 a+b two layers › Cystatin-like › DsbC/DsbG N-terminal domain-like › DsbC/DsbG N-terminal domain-like › DsbG_N 0.59 45.0 4.19e-01 84.2% 65.6%
3939966 292.2.1.0 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.59 41.0 3.70e-01 73.7% 68.2%
5034088 3504.3.1.1 beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.59 42.0 3.40e-01 80.3% 38.7%
4013556 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.58 50.0 3.11e-01 96.1% 69.9%
3663850 708.1.1.8 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FAR1 0.58 41.0 3.91e-01 76.3% 69.5%
4952127 2004.1.1.67 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CbiA 0.58 47.0 3.31e-01 86.8% 35.1%
3206031 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.57 41.0 3.86e-01 77.6% 65.3%
3746407 5.1.5.64 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DCAF17 0.57 47.0 2.90e-01 90.8% 16.9%
3970566 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.57 50.0 3.86e-01 100.0% 56.1%
4977909 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.57 41.0 3.68e-01 77.6% 60.0%
3245739 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.57 44.0 3.42e-01 84.2% 51.2%
3548297 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.56 46.0 3.01e-01 90.8% 90.7%
5020988 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.56 46.0 3.41e-01 90.8% 72.0%
4029197 867.1.1.1 a+b three layers › Coproporphyrinogen III oxidase › Coproporphyrinogen III oxidase › Coproporphyrinogen III oxidase › Coprogen_oxidas 0.56 42.0 2.89e-01 82.9% 84.9%
3627778 220.1.1.64 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C1_MyoVII 0.55 40.0 3.69e-01 76.3% 77.0%
3694712 5.1.5.4 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N 0.55 47.0 2.91e-01 100.0% 17.2%
3924612 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.55 44.0 3.70e-01 89.5% 63.7%
4159682 708.1.1.23 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › BAF1_ABF1 0.55 39.0 3.74e-01 76.3% 67.8%
3568424 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.54 42.0 3.15e-01 84.2% 46.7%
185771 3561.1.1.0 a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 0.54 40.0 2.51e-01 82.9% 12.8%
3593021 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 39.0 3.35e-01 80.3% 78.5%
3618632 2003.1.5.13 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth 0.52 40.0 2.71e-01 86.8% 47.5%
5007358 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.51 37.0 3.18e-01 77.6% 48.8%
3941202 5.1.4.501 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › LLGL, ANAPC4_WD40 0.50 43.0 2.77e-01 98.7% 20.8%
3264908 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.50 40.0 2.57e-01 86.8% 26.7%
224426 3647.1.1.1 beta sandwiches › Hypothetical Protein lmo2686 › Hypothetical Protein lmo2686 › Hypothetical Protein lmo2686 › DUF5626 0.50 38.0 3.24e-01 85.5% 55.1%