←Back to structures
MH744418.1__AYD81483.1__SEA_JUSTBECAUSE_328__00314
Bact-VirMH744418.1__AYD81483.1__SEA_JUSTBECAUSE_328__00314
Identity
- Accession:
- MH744418 ↗
- Kingdom:
- phage
Quality
94.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-89
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6lkzC01 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.58 | 46.0 | 3.06e-01 | 87.1% | 59.4% |
| 4wiwA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.58 | 35.0 | 3.82e-01 | 70.6% | 73.9% |
| 3owvB00 | 3.40.570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Extracellular Endonuclease; Chain A › Extracellular Endonuclease, subunit A | 0.57 | 40.0 | 2.99e-01 | 72.9% | 28.1% |
| 2rfrA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 39.0 | 3.31e-01 | 71.8% | 57.1% |
| 3itwA02 | 3.30.720.110 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.57 | 34.0 | 3.98e-01 | 71.8% | 91.1% |
| 1kiaA01 | 3.30.46.10 | Alpha Beta › 2-Layer Sandwich › Glycine N-methyltransferase; chain A, domain 1 › Glycine N-methyltransferase, chain A, domain 1 | 0.56 | 38.0 | 3.91e-01 | 71.8% | 92.8% |
| 5cxwA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.55 | 41.0 | 2.72e-01 | 80.0% | 79.5% |
| 2y1sA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.55 | 37.0 | 3.45e-01 | 100.0% | 53.7% |
| 3eo4D00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 37.0 | 3.05e-01 | 70.6% | 37.0% |
| 6s5xA01 | 2.60.40.3600 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 42.0 | 4.43e-01 | 94.1% | 97.3% |
| 6kghA02 | 3.30.450.330 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.53 | 39.0 | 3.28e-01 | 80.0% | 70.8% |
| 4wyqB00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 34.0 | 3.61e-01 | 80.0% | 77.3% |
| 3f14A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 36.0 | 3.33e-01 | 72.9% | 67.0% |
| 4me3A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 32.0 | 3.07e-01 | 98.8% | 54.6% |
| 4fcaA04 | 2.60.40.3600 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 35.0 | 3.69e-01 | 74.1% | 92.3% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3198610 | 206.1.1.73 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, APH | 0.64 | 34.0 | 2.44e-01 | 77.6% | 16.9% |
| 4578663 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.62 | 36.0 | 3.89e-01 | 71.8% | 67.1% |
| 5004850 | 375.1.1.21 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 | 0.61 | 34.0 | 4.16e-01 | 96.5% | 90.0% |
| 3281255 | 101.1.2.742 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7782 | 0.61 | 45.0 | 4.06e-01 | 96.5% | 55.8% |
| 149135 | 218.1.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N | 0.60 | 34.0 | 3.08e-01 | 96.5% | 41.5% |
| 4960238 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 33.0 | 4.06e-01 | 97.6% | 92.0% |
| 4002242 | 213.1.1.81 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › DUF7596 | 0.59 | 37.0 | 3.28e-01 | 95.3% | 43.0% |
| 3587399 | 331.1.1.2 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › Rep_trans | 0.59 | 40.0 | 3.29e-01 | 71.8% | 43.6% |
| 4936480 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.58 | 40.0 | 3.12e-01 | 70.6% | 36.0% |
| 5077400 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.57 | 36.0 | 3.42e-01 | 91.8% | 51.0% |
| 3383138 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 37.0 | 3.89e-01 | 98.8% | 74.4% |
| 3396324 | 295.1.1.4 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain | 0.56 | 32.0 | 3.53e-01 | 96.5% | 70.8% |
| 1156978 | 3735.1.1.2 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › SpvB,TcdB_toxin_midC,TcdB_toxin_midN | 0.55 | 43.0 | 2.87e-01 | 87.1% | 97.6% |
| 2557441 | 3414.1.1.2 ↗ | beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › Rib | 0.54 | 42.0 | 4.25e-01 | 94.1% | 88.0% |
| None | — | 0.54 | 42.0 | 4.29e-01 | 94.1% | 91.3% | |
| 2393265 | 3735.1.1.1 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › SpvB | 0.53 | 42.0 | 2.82e-01 | 88.2% | 95.2% |
| 4879890 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 29.0 | 3.11e-01 | 77.6% | 59.2% |
| 4418043 | 207.12.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Protein M antibody-binding region › Protein M antibody-binding region | 0.52 | 44.0 | 2.93e-01 | 97.6% | 33.3% |
| 2557442 | 3414.1.1.2 ↗ | beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › Rib | 0.52 | 41.0 | 4.20e-01 | 94.1% | 91.5% |
| 3734418 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.52 | 39.0 | 2.65e-01 | 80.0% | 42.1% |
| 3499411 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.52 | 42.0 | 2.67e-01 | 92.9% | 77.5% |
| 3788613 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.52 | 44.0 | 3.69e-01 | 100.0% | 85.6% |
| 4331578 | 243.3.1.5 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › FTP | 0.51 | 40.0 | 3.78e-01 | 85.9% | 84.8% |
| 1156975 | 3735.1.1.2 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › SpvB,TcdB_toxin_midC,TcdB_toxin_midN | 0.51 | 43.0 | 2.86e-01 | 94.1% | 67.2% |
| 3584039 | 5.1.5.89 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PF31099 | 0.51 | 40.0 | 2.61e-01 | 100.0% | 18.2% |
| 1937871 | 3414.1.1.3 ↗ | beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › Bact_surface_Ig-like | 0.51 | 40.0 | 3.96e-01 | 94.1% | 81.1% |
| 3460838 | 2484.1.1.157 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 | 0.51 | 36.0 | 2.46e-01 | 98.8% | 20.7% |
| 4946484 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 39.0 | 3.33e-01 | 85.9% | 84.7% |
| 4940592 | 3414.1.1.0 ↗ | beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein | 0.50 | 39.0 | 4.16e-01 | 91.8% | 94.7% |