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MH744420.1__AYD81634.1__SEA_KROMP_33__00033

Bact-Vir

MH744420.1__AYD81634.1__SEA_KROMP_33__00033

Identity

Accession:
MH744420 ↗
Kingdom:
phage

Quality

81.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 24-129
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF27765.1 best UCP032817-like 43.7 3.80e-11 83.0% 44.5%
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ekfA01 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.65 28.0 4.23e-01 92.5% 95.7%
4udsA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.62 46.0 3.81e-01 77.4% 84.7%
3fbzA01 1.20.58.800 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 43.0 4.42e-01 74.5% 86.3%
2yskA00 1.10.490.110 Mainly Alpha › Orthogonal Bundle › Globin-like › Uncharacterized conserved protein DUF2267 0.58 44.0 3.97e-01 80.2% 91.0%
6e1kA01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.57 39.0 3.88e-01 70.8% 71.4%
2zgyA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.55 39.0 3.57e-01 73.6% 87.1%
2zcxA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.51 40.0 3.30e-01 85.8% 88.8%
2h7oA01 1.20.120.1330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Rac1-binding domain, N-terminal GTPase binding subdomain 0.50 35.0 3.31e-01 70.8% 65.0%
1vi0A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.50 40.0 3.66e-01 87.7% 90.3%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4979205 613.1.1.0 alpha complex topology › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 0.64 48.0 4.06e-01 80.2% 76.8%
3939120 180.1.1.1 alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › PAP2 0.58 40.0 3.55e-01 71.7% 81.2%
3962059 149.1.1.1 alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.55 39.0 2.89e-01 74.5% 59.3%
3170542 101.1.2.106 alpha arrays › HTH › HTH › winged helix domain › Tam41_Mmp37 0.54 38.0 3.79e-01 73.6% 90.9%
3596578 3069.1.1.0 alpha arrays › BART › BART › BART 0.53 33.0 3.10e-01 70.8% 50.0%
3192648 109.4.1.681 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans_2 0.53 38.0 2.69e-01 77.4% 37.1%
1948686 150.1.1.1 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Ferritin 0.50 42.0 3.50e-01 91.5% 82.2%