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MH766655.1__QDB70112.1__X__00009
Bact-VirMH766655.1__QDB70112.1__X__00009
Identity
- Accession:
- MH766655 ↗
- Kingdom:
- phage
Quality
88.0
mean pLDDT
Cluster
View cluster (10 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-69
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01258.24 best | zf-dskA_traR | 50.0 | 3.40e-13 | 59.7% | 86.1% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kq9A00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.71 | 49.0 | 4.06e-01 | 71.6% | 55.4% |
| 1e1hB01 | 1.20.58.540 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 43.0 | 3.69e-01 | 97.0% | 41.7% |
| 4ijjB00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.59 | 49.0 | 4.08e-01 | 98.5% | 59.2% |
| 4l3uA00 | 1.20.1480.40 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › Uncharacterised protein PF16133, DUF4844 | 0.58 | 42.0 | 3.47e-01 | 76.1% | 90.2% |
| 1zbdB00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.57 | 45.0 | 3.68e-01 | 100.0% | 46.3% |
| 2ljxA00 | 3.30.240.40 | Alpha Beta › 2-Layer Sandwich › CRO Repressor › E6 early regulatory protein | 0.57 | 39.0 | 3.73e-01 | 71.6% | 86.6% |
| 1l8dA00 | 1.10.287.510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.55 | 49.0 | 4.24e-01 | 98.5% | 68.9% |
| 1t95A02 | 1.10.10.900 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › SBDS protein C-terminal domain, subdomain 1 | 0.55 | 40.0 | 3.85e-01 | 77.6% | 94.7% |
| 1iduA02 | 1.10.606.10 | Mainly Alpha › Orthogonal Bundle › Vanadium-containing Chloroperoxidase; domain 2 › Vanadium-containing Chloroperoxidase, domain 2 | 0.54 | 44.0 | 2.70e-01 | 88.1% | 20.0% |
| 1x4wA00 | 4.10.1110.10 | Few Secondary Structures › Irregular › Zf-an1 domain › AN1-like Zinc finger | 0.53 | 37.0 | 3.70e-01 | 82.1% | 74.6% |
| 7rsfA01 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 43.0 | 3.66e-01 | 97.0% | 90.1% |
| 2xotB01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.51 | 43.0 | 2.99e-01 | 100.0% | 78.9% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5029796 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.71 | 49.0 | 4.00e-01 | 92.5% | 40.0% |
| 3488429 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.69 | 51.0 | 3.66e-01 | 77.6% | 38.9% |
| 3485716 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.67 | 50.0 | 3.55e-01 | 77.6% | 37.9% |
| 5082442 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.67 | 50.0 | 4.00e-01 | 79.1% | 44.6% |
| 3597604 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.67 | 55.0 | 3.86e-01 | 88.1% | 33.0% |
| 3550392 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 49.0 | 3.54e-01 | 77.6% | 39.5% |
| 5064397 | 5086.1.1.231 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › Rad50_zn_hook | 0.66 | 49.0 | 3.52e-01 | 79.1% | 30.3% |
| 119208 | 377.1.1.7 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-dskA_traR | 0.66 | 53.0 | 4.82e-01 | 86.6% | 73.9% |
| 3721501 | 101.1.17.23 ↗ | alpha arrays › HTH › HTH › FF domain › PF26803 | 0.64 | 55.0 | 3.98e-01 | 92.5% | 65.6% |
| 3893146 | 3860.1.1.0 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm | 0.64 | 52.0 | 4.31e-01 | 89.6% | 51.7% |
| 4004118 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.64 | 49.0 | 3.48e-01 | 80.6% | 38.4% |
| 5064040 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.63 | 47.0 | 3.29e-01 | 79.1% | 25.9% |
| 4291301 | 192.10.1.8 ↗ | alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain › zf-dskA_traR | 0.62 | 50.0 | 4.11e-01 | 95.5% | 48.3% |
| 4021486 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.62 | 43.0 | 2.66e-01 | 71.6% | 13.2% |
| 3259236 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.60 | 44.0 | 3.90e-01 | 77.6% | 81.0% |
| 3711823 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.60 | 51.0 | 4.16e-01 | 94.0% | 89.6% |
| 3973966 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.59 | 50.0 | 4.48e-01 | 97.0% | 71.0% |
| 3988969 | 1075.3.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 | 0.59 | 46.0 | 3.02e-01 | 100.0% | 20.0% |
| 5023516 | 3922.1.1.269 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Rad50_zn_hook | 0.56 | 51.0 | 3.43e-01 | 98.5% | 30.2% |
| 2083461 | 377.1.1.7 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-dskA_traR | 0.56 | 45.0 | 4.53e-01 | 100.0% | 91.4% |
| 4936611 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.56 | 50.0 | 3.07e-01 | 100.0% | 33.7% |
| 5083711 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.55 | 50.0 | 3.34e-01 | 98.5% | 49.6% |
| 3715448 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.55 | 50.0 | 3.81e-01 | 100.0% | 66.0% |
| 3586850 | 1075.3.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 | 0.54 | 44.0 | 2.97e-01 | 100.0% | 22.1% |
| 3411883 | 604.1.1.63 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_SESTD1 | 0.53 | 47.0 | 3.88e-01 | 97.0% | 55.8% |
| 3257271 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.53 | 44.0 | 3.87e-01 | 97.0% | 63.2% |
| None | — | 0.51 | 44.0 | 2.71e-01 | 94.0% | 23.0% |