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MH766655.1__QDB70117.1__X__00014
Bact-VirMH766655.1__QDB70117.1__X__00014
Identity
- Accession:
- MH766655 ↗
- Kingdom:
- phage
Quality
91.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 4-99
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rkkA01 | 1.25.40.270 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein vta1 | 0.72 | 52.0 | 4.39e-01 | 75.0% | 77.6% |
| 3rc3A05 | 1.20.58.1080 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 49.0 | 4.65e-01 | 72.9% | 94.7% |
| 2lhrA00 | 1.20.58.1270 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 44.0 | 4.82e-01 | 70.8% | 80.8% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.63 | 40.0 | 4.61e-01 | 85.4% | 91.0% |
| 4i9cA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.62 | 57.0 | 4.31e-01 | 100.0% | 73.3% |
| 5jjxA01 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.62 | 52.0 | 3.69e-01 | 92.7% | 63.0% |
| 1wjtA00 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.60 | 47.0 | 4.66e-01 | 85.4% | 86.4% |
| 4dlqA02 | 1.25.40.610 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.59 | 43.0 | 4.40e-01 | 80.2% | 100.0% |
| 2g3bA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.59 | 45.0 | 3.59e-01 | 81.2% | 63.1% |
| 4ioeA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.58 | 37.0 | 3.90e-01 | 86.5% | 71.3% |
| 5cwhA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.57 | 51.0 | 4.37e-01 | 100.0% | 82.7% |
| 1jm6B02 | 1.20.140.20 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Alpha-ketoacid/pyruvate dehydrogenase kinase, N-terminal domain | 0.57 | 43.0 | 3.66e-01 | 80.2% | 87.3% |
| 3l09A01 | 1.20.58.1460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 41.0 | 4.14e-01 | 79.2% | 99.0% |
| 2dbaA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.56 | 51.0 | 4.76e-01 | 100.0% | 94.9% |
| 8e9gK01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 35.0 | 3.61e-01 | 87.5% | 67.0% |
| 7zmgL01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 35.0 | 3.75e-01 | 88.5% | 75.0% |
| 2oezA02 | 1.10.3900.10 | Mainly Alpha › Orthogonal Bundle › YacF-like › YacF-like | 0.54 | 47.0 | 3.90e-01 | 93.8% | 91.4% |
| 2np5D00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 41.0 | 3.49e-01 | 84.4% | 93.0% |
| 4lwsA00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.52 | 34.0 | 3.36e-01 | 86.5% | 62.0% |
| 1zk8B02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 35.0 | 3.17e-01 | 93.8% | 51.5% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3738678 | 3343.1.1.0 ↗ | alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) | 0.76 | 43.0 | 3.93e-01 | 83.3% | 44.0% |
| 3356344 | 109.4.1.43 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SAC3_GANP | 0.75 | 62.0 | 4.46e-01 | 88.5% | 69.6% |
| 3784860 | 109.4.1.1471 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_IPO5 | 0.69 | 62.0 | 4.46e-01 | 100.0% | 54.9% |
| 3244304 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.69 | 62.0 | 4.52e-01 | 100.0% | 59.2% |
| 4026684 | 192.20.1.7 ↗ | alpha bundles › Long alpha-hairpin › helical hairpin domain in transcriptional anti-activator ExsD › helical hairpin domain in transcriptional anti-activator ExsD › PF26729 | 0.66 | 41.0 | 4.03e-01 | 85.4% | 57.1% |
| 3970414 | 109.51.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › TssA helical domains › TssA helical domains › T6SS_VasJ | 0.64 | 58.0 | 5.14e-01 | 100.0% | 69.9% |
| 3178356 | 109.4.1.17 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cullin | 0.64 | 45.0 | 3.07e-01 | 74.0% | 34.2% |
| 4253382 | 150.3.1.4 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine › IFN-gamma | 0.64 | 46.0 | 4.28e-01 | 92.7% | 60.0% |
| 3408275 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 55.0 | 4.11e-01 | 93.8% | 47.4% |
| 3660177 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 50.0 | 4.49e-01 | 100.0% | 60.7% |
| 3410446 | 109.4.1.517 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Med24_N | 0.62 | 54.0 | 4.12e-01 | 100.0% | 90.8% |
| 3601705 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.62 | 44.0 | 3.11e-01 | 76.0% | 68.4% |
| 3740779 | 604.12.1.2 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Vta1 | 0.61 | 39.0 | 4.31e-01 | 93.8% | 81.3% |
| 3708428 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 55.0 | 4.40e-01 | 100.0% | 60.5% |
| 4990309 | 150.2.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Cobalamin adenosyltransferase › Cobalamin adenosyltransferase › Cob_adeno_trans | 0.61 | 46.0 | 3.78e-01 | 79.2% | 63.0% |
| 3574038 | 109.4.1.235 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SRP68 | 0.60 | 53.0 | 3.40e-01 | 100.0% | 49.8% |
| 4013703 | 109.4.1.1244 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_30 | 0.59 | 52.0 | 4.62e-01 | 100.0% | 82.9% |
| 3283672 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.58 | 50.0 | 3.72e-01 | 100.0% | 88.9% |
| 3390898 | 192.1.1.0 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain | 0.56 | 46.0 | 4.56e-01 | 93.8% | 84.0% |
| 3657937 | 109.4.1.1659 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nodulin_N | 0.55 | 46.0 | 2.99e-01 | 100.0% | 47.7% |
| 4271673 | 3352.1.1.27 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › EpsG | 0.55 | 49.0 | 3.41e-01 | 100.0% | 84.6% |
| 4932209 | 3843.1.1.6 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › MrpF_PhaF | 0.55 | 35.0 | 3.77e-01 | 89.6% | 77.5% |
| 4262515 | 610.4.1.1 ↗ | alpha arrays › ERP29 C domain-like › YqeY domain › YqeY domain › YqeY | 0.54 | 40.0 | 3.95e-01 | 76.0% | 100.0% |
| 3251989 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.54 | 44.0 | 3.06e-01 | 100.0% | 25.1% |
| 3246381 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.53 | 43.0 | 3.76e-01 | 85.4% | 60.7% |
| 4003222 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.52 | 44.0 | 4.41e-01 | 92.7% | 97.0% |
D2
medium
residues 100-154
Domain cluster:
representative
CATH (58)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zbpA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.90 | 80.0 | 6.81e-01 | 100.0% | 62.4% |
| 1kt1A03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.89 | 79.0 | 5.48e-01 | 100.0% | 32.9% |
| 3draA00 | 1.25.40.120 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Protein prenylyltransferase | 0.85 | 67.0 | 4.09e-01 | 89.1% | 15.2% |
| 3sz7A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.85 | 69.0 | 4.89e-01 | 92.7% | 31.8% |
| 2e2eA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.85 | 77.0 | 5.50e-01 | 100.0% | 36.4% |
| 3u4tB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.84 | 70.0 | 4.44e-01 | 96.4% | 19.5% |
| 4rg9B01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.83 | 67.0 | 4.67e-01 | 94.5% | 28.7% |
| 2yhcA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.83 | 72.0 | 4.73e-01 | 94.5% | 24.9% |
| 8g0lB01 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.83 | 69.0 | 4.06e-01 | 94.5% | 12.9% |
| 6i57A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.83 | 70.0 | 5.29e-01 | 100.0% | 40.8% |
| 2c2lA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.82 | 74.0 | 5.51e-01 | 100.0% | 43.6% |
| 1td6A01 | 1.20.1480.10 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › hypothetical protein mp506/mpn330, domain 1 | 0.82 | 75.0 | 6.01e-01 | 100.0% | 55.9% |
| 2crbA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.82 | 74.0 | 6.09e-01 | 100.0% | 72.2% |
| 3beeA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.82 | 67.0 | 5.62e-01 | 90.9% | 53.8% |
| 2l6jA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.82 | 72.0 | 5.63e-01 | 96.4% | 50.5% |
| 6xssA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.81 | 65.0 | 6.00e-01 | 92.7% | 69.6% |
| 4ui9Y03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.81 | 63.0 | 5.55e-01 | 92.7% | 58.7% |
| 7qihA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.80 | 64.0 | 5.23e-01 | 92.7% | 47.5% |
| 4gywA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.80 | 64.0 | 5.05e-01 | 92.7% | 43.2% |
| 2xevB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.80 | 67.0 | 5.10e-01 | 92.7% | 41.1% |
| 3na7A00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.78 | 57.0 | 3.67e-01 | 78.2% | 19.0% |
| 6r1nA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.77 | 57.0 | 4.54e-01 | 78.2% | 70.9% |
| 4ga0A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.77 | 62.0 | 4.61e-01 | 94.5% | 34.3% |
| 4lctB00 | 1.25.40.570 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.77 | 65.0 | 3.95e-01 | 94.5% | 53.4% |
| 4y6cA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.77 | 64.0 | 4.28e-01 | 92.7% | 26.4% |
| 3qdnA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.76 | 60.0 | 5.25e-01 | 92.7% | 57.1% |
| 2vgxB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.76 | 64.0 | 4.74e-01 | 94.5% | 38.6% |
| 2hr2A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.76 | 64.0 | 4.63e-01 | 94.5% | 63.5% |
| 2v6yA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.76 | 68.0 | 6.10e-01 | 100.0% | 88.0% |
| 1jkvA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.76 | 68.0 | 4.58e-01 | 100.0% | 82.7% |
| 1rj1A00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.76 | 66.0 | 4.85e-01 | 100.0% | 48.6% |
| 2vkjA00 | 1.20.58.2030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.75 | 64.0 | 5.13e-01 | 94.5% | 50.0% |
| 2j4bB00 | 1.25.40.500 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TFIID subunit TAF5, NTD2 domain | 0.75 | 58.0 | 4.33e-01 | 90.9% | 34.6% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.74 | 54.0 | 4.62e-01 | 78.2% | 80.0% |
| 2e5yA02 | 1.20.5.440 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain | 0.73 | 53.0 | 5.71e-01 | 78.2% | 97.8% |
| 4aifA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.73 | 61.0 | 4.51e-01 | 94.5% | 56.2% |
| 2a26B01 | 4.10.860.10 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain | 0.73 | 51.0 | 5.60e-01 | 74.5% | 100.0% |
| 2ib0A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.72 | 63.0 | 4.77e-01 | 100.0% | 89.6% |
| 4kvmA01 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.72 | 61.0 | 3.52e-01 | 94.5% | 10.8% |
| 2katA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.72 | 61.0 | 4.88e-01 | 98.2% | 48.7% |
| 5c8aA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.71 | 58.0 | 5.22e-01 | 92.7% | 94.9% |
| 3layF00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.70 | 51.0 | 4.56e-01 | 78.2% | 64.1% |
| 1sr2A00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.70 | 57.0 | 4.52e-01 | 90.9% | 45.7% |
| 1wfdA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.69 | 59.0 | 5.06e-01 | 100.0% | 76.3% |
| 6xxvC00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.69 | 59.0 | 4.79e-01 | 100.0% | 90.1% |
| 3uj9A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.68 | 59.0 | 3.83e-01 | 100.0% | 88.8% |
| 3pubA01 | 1.10.10.2400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Lepidopteran low molecular weight (30 kD) lipoprotein, N-terminal domain | 0.67 | 55.0 | 4.99e-01 | 90.9% | 75.7% |
| 4h63H01 | 1.20.58.1710 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 48.0 | 4.44e-01 | 78.2% | 62.5% |
| 2mpkA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.66 | 53.0 | 4.94e-01 | 94.5% | 94.6% |
| 2pftA00 | 1.20.1280.170 | Mainly Alpha › Up-down Bundle › Monooxygenase › Exocyst complex component Exo70 | 0.65 | 56.0 | 3.29e-01 | 100.0% | 14.3% |
| 1ku9A02 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.63 | 45.0 | 4.33e-01 | 78.2% | 70.3% |
| 2etnB01 | 1.10.287.180 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain | 0.62 | 44.0 | 4.07e-01 | 78.2% | 76.3% |
| 7dukB01 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.61 | 42.0 | 4.50e-01 | 70.9% | 91.3% |
| 3kyiA00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.61 | 47.0 | 3.76e-01 | 90.9% | 50.8% |
| 2e62A01 | 6.10.140.420 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 41.0 | 4.24e-01 | 72.7% | 75.0% |
| 5mmjb02 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.60 | 42.0 | 4.38e-01 | 70.9% | 82.7% |
| 1b5lA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.60 | 49.0 | 3.64e-01 | 94.5% | 77.0% |
| 1rvkA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.59 | 47.0 | 3.92e-01 | 100.0% | 46.6% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3501864 | 109.4.1.2496 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2, TPR_8, TPR_12, TPR_16, ARM_TT21, PF30153, PF30154 | 0.87 | 71.0 | 4.17e-01 | 92.7% | 12.0% |
| 3587818 | 109.4.1.2604 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19, ARM_TT21, PF30153, PF30154 | 0.86 | 70.0 | 4.09e-01 | 92.7% | 11.7% |
| 3616190 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.85 | 69.0 | 4.84e-01 | 92.7% | 30.0% |
| 4949192 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.85 | 72.0 | 5.17e-01 | 90.9% | 34.7% |
| 3164633 | 109.4.1.924 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_CcmH_CycH | 0.85 | 77.0 | 5.11e-01 | 100.0% | 27.0% |
| 4195422 | 109.4.1.5 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1 | 0.85 | 76.0 | 5.84e-01 | 100.0% | 45.8% |
| 3168689 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.84 | 77.0 | 5.03e-01 | 100.0% | 26.2% |
| 3595030 | 109.4.1.1312 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30475 | 0.83 | 67.0 | 4.24e-01 | 92.7% | 19.2% |
| 3346740 | 109.4.1.1374 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, TPR_24 | 0.82 | 67.0 | 4.47e-01 | 98.2% | 23.9% |
| 166409 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.82 | 68.0 | 5.68e-01 | 90.9% | 54.3% |
| 3252144 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.82 | 73.0 | 6.75e-01 | 100.0% | 100.0% |
| 3356444 | 109.4.1.1271 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, TPR_24 | 0.81 | 67.0 | 5.27e-01 | 98.2% | 44.5% |
| 3214310 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.81 | 69.0 | 4.90e-01 | 92.7% | 37.4% |
| 3635652 | 109.4.1.1276 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FAT, HEAT_ATR | 0.81 | 68.0 | 4.27e-01 | 92.7% | 26.4% |
| 3365142 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.81 | 68.0 | 4.40e-01 | 92.7% | 21.7% |
| 3923922 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.80 | 72.0 | 6.49e-01 | 100.0% | 97.3% |
| 3802549 | 109.4.1.1519 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_3, PPR_long, TPR_24 | 0.80 | 67.0 | 4.05e-01 | 94.5% | 14.5% |
| 400738 | 109.4.1.206 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › YfiO | 0.80 | 67.0 | 5.10e-01 | 92.7% | 41.1% |
| 4950305 | 3932.1.1.0 ↗ | alpha bundles › CRISPR/Cas system-associated protein Csm6 6H domain › CRISPR/Cas system-associated protein Csm6 6H domain › CRISPR/Cas system-associated protein Csm6 6H domain | 0.79 | 62.0 | 5.71e-01 | 90.9% | 67.1% |
| 3681530 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.79 | 65.0 | 4.29e-01 | 92.7% | 23.9% |
| 3669707 | 109.4.1.1156 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › E_motif | 0.78 | 62.0 | 5.17e-01 | 92.7% | 50.5% |
| 3305845 | 109.4.1.1256 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 | 0.78 | 68.0 | 5.47e-01 | 94.5% | 82.0% |
| 4251849 | 605.1.1.310 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Dynamitin | 0.78 | 57.0 | 5.42e-01 | 78.2% | 69.2% |
| 3337553 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.78 | 67.0 | 4.88e-01 | 94.5% | 56.6% |
| 3718851 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.78 | 69.0 | 4.65e-01 | 100.0% | 28.5% |
| 3374155 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.78 | 67.0 | 5.45e-01 | 94.5% | 82.0% |
| 3883328 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.77 | 62.0 | 5.21e-01 | 92.7% | 51.6% |
| 3400992 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.77 | 66.0 | 4.65e-01 | 98.2% | 31.2% |
| 3742057 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.77 | 69.0 | 3.97e-01 | 100.0% | 13.2% |
| 3420679 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.77 | 66.0 | 5.32e-01 | 92.7% | 81.0% |
| 3272203 | 109.4.1.602 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Dor1 | 0.76 | 66.0 | 3.97e-01 | 100.0% | 16.2% |
| 3679964 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.76 | 69.0 | 5.05e-01 | 100.0% | 82.1% |
| 3216960 | 109.4.1.496 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec5 | 0.75 | 67.0 | 3.77e-01 | 100.0% | 17.8% |
| 3584334 | 604.12.1.56 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ASTER | 0.74 | 64.0 | 5.53e-01 | 100.0% | 74.4% |
| 3677309 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.74 | 67.0 | 4.06e-01 | 100.0% | 81.7% |
| 3323070 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.74 | 63.0 | 4.71e-01 | 94.5% | 59.3% |
| 3725474 | 604.9.1.0 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 | 0.74 | 56.0 | 5.19e-01 | 81.8% | 72.9% |
| 3492325 | 109.4.1.602 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Dor1 | 0.74 | 64.0 | 4.54e-01 | 100.0% | 37.6% |
| 3831444 | 109.4.1.1293 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1 | 0.74 | 67.0 | 5.11e-01 | 100.0% | 70.8% |
| 3452072 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.73 | 65.0 | 4.82e-01 | 100.0% | 39.3% |
| 3327449 | 109.4.1.1275 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long, TPR_24 | 0.73 | 66.0 | 3.97e-01 | 100.0% | 23.1% |
| 4983638 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.73 | 63.0 | 5.92e-01 | 100.0% | 85.5% |
| 3270015 | 109.4.1.338 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RIC1 | 0.72 | 61.0 | 3.94e-01 | 94.5% | 23.6% |
| 3240217 | 603.1.1.105 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF31021 | 0.72 | 61.0 | 5.12e-01 | 96.4% | 100.0% |
| 3501687 | 109.4.1.228 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Exo84_C | 0.72 | 61.0 | 3.72e-01 | 100.0% | 15.9% |
| 3485316 | 109.7.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E | 0.72 | 59.0 | 5.53e-01 | 92.7% | 77.1% |
| 4016253 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.71 | 51.0 | 4.21e-01 | 78.2% | 46.7% |
| 3741751 | 109.4.1.602 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Dor1 | 0.71 | 60.0 | 4.01e-01 | 100.0% | 27.0% |
| 3664730 | 109.4.1.1257 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 | 0.70 | 64.0 | 3.94e-01 | 100.0% | 26.9% |
| 3383965 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.70 | 62.0 | 3.97e-01 | 100.0% | 89.0% |
| 3262083 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.67 | 57.0 | 4.72e-01 | 100.0% | 84.8% |
| 3972600 | 622.4.1.65 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › DUF2784 | 0.66 | 55.0 | 4.97e-01 | 98.2% | 87.5% |
| 3884683 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.65 | 47.0 | 3.70e-01 | 78.2% | 72.5% |
| 5008560 | 4995.1.1.1 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 | 0.62 | 52.0 | 4.23e-01 | 94.5% | 63.8% |
| 3371667 | 7516.1.1.47 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Cellulose_synt | 0.60 | 47.0 | 2.65e-01 | 87.3% | 22.2% |
| 3635288 | 3930.2.1.0 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in endoribonuclease Dicer › Helical bundle in endoribonuclease Dicer | 0.59 | 48.0 | 4.05e-01 | 94.5% | 75.0% |