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MH817999.1__AYJ72858.1__CPT_Seifer_076__00076
Bact-VirMH817999.1__AYJ72858.1__CPT_Seifer_076__00076
Identity
- Accession:
- MH817999 ↗
- Kingdom:
- phage
Quality
64.3
mean pLDDT
Taxonomy
TaxID: 2315475
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 37-78
D2
high
residues 89-154
Domain cluster:
rep: ON146294.1__URG13002.1__B2_9__00009__D7-62
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6asoH00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 43.0 | 4.08e-01 | 100.0% | 60.2% |
| 4c92G00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 46.0 | 4.49e-01 | 100.0% | 73.3% |
| 3be3A00 | 2.30.30.320 | Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain | 0.60 | 54.0 | 5.14e-01 | 100.0% | 84.2% |
| 4f0qA02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.59 | 50.0 | 3.71e-01 | 100.0% | 60.9% |
| 5tf2A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 45.0 | 2.88e-01 | 83.3% | 26.9% |
| 1vw4M01 | 2.30.30.790 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 49.0 | 3.97e-01 | 100.0% | 47.0% |
| 4c0dC00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.59 | 44.0 | 3.47e-01 | 98.5% | 38.0% |
| 4emhA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 44.0 | 4.62e-01 | 100.0% | 91.7% |
| 2l3rA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 46.0 | 4.53e-01 | 100.0% | 80.8% |
| 4c0fC00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.58 | 45.0 | 3.83e-01 | 100.0% | 50.9% |
| 3nv0B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 44.0 | 3.52e-01 | 83.3% | 83.8% |
| 4ckbD03 | 2.40.50.830 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.57 | 46.0 | 3.75e-01 | 92.4% | 72.4% |
| 3ub1D02 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 43.0 | 3.67e-01 | 83.3% | 78.9% |
| 4fwwA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 47.0 | 2.92e-01 | 98.5% | 40.0% |
| 4c0dB00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.56 | 43.0 | 3.19e-01 | 100.0% | 29.8% |
| 3pggA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 44.0 | 4.25e-01 | 100.0% | 74.4% |
| 4d47A00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 44.0 | 2.77e-01 | 92.4% | 29.2% |
| 1eurA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.55 | 47.0 | 3.00e-01 | 100.0% | 36.6% |
| 2chcC00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 42.0 | 3.34e-01 | 90.9% | 88.7% |
| 2w20B01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.53 | 46.0 | 2.90e-01 | 100.0% | 95.9% |
| 3h51A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 42.0 | 3.40e-01 | 89.4% | 88.7% |
| 4mb7A01 | 3.20.190.10 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal | 0.53 | 45.0 | 3.70e-01 | 97.0% | 63.5% |
| 1e8uA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.52 | 44.0 | 2.74e-01 | 100.0% | 52.7% |
| 6u5uG07 | 3.30.1120.100 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.52 | 40.0 | 3.28e-01 | 86.4% | 97.0% |
| 2xriA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.52 | 39.0 | 2.96e-01 | 89.4% | 62.9% |
| 2fkcA01 | 3.40.1350.40 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.52 | 40.0 | 3.52e-01 | 89.4% | 80.0% |
| 2dmyA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 41.0 | 3.71e-01 | 90.9% | 70.1% |
| 1of5A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 39.0 | 3.09e-01 | 84.8% | 72.7% |
| 3gvzA00 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.51 | 41.0 | 2.83e-01 | 92.4% | 92.2% |
| 4hkqA04 | 3.10.20.370 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.51 | 41.0 | 3.94e-01 | 92.4% | 94.7% |
| 1ar0A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 40.0 | 3.40e-01 | 92.4% | 86.4% |
| 3ef8A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 40.0 | 3.20e-01 | 89.4% | 77.7% |
| 4orlA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 42.0 | 3.59e-01 | 92.4% | 88.2% |
| 3rcyB01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.50 | 37.0 | 3.03e-01 | 83.3% | 66.7% |
| 2mdrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.50 | 39.0 | 3.54e-01 | 87.9% | 66.0% |
| 4ntqB00 | 3.30.2450.20 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.50 | 41.0 | 3.32e-01 | 95.5% | 46.9% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3226615 | 4.1.1.389 ↗ | beta barrels › SH3 › SH3 › SH3 › PF30352 | 0.63 | 47.0 | 4.22e-01 | 100.0% | 56.8% |
| 5062495 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.61 | 45.0 | 2.90e-01 | 81.8% | 20.9% |
| 3786396 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.61 | 47.0 | 3.90e-01 | 100.0% | 44.6% |
| 3744711 | 4.1.1.41 ↗ | beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C | 0.59 | 46.0 | 3.43e-01 | 100.0% | 32.9% |
| 2632533 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.58 | 46.0 | 4.55e-01 | 100.0% | 82.6% |
| 1108456 | 4.1.1.41 ↗ | beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C | 0.57 | 43.0 | 3.80e-01 | 100.0% | 52.8% |
| 1397885 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.56 | 47.0 | 3.51e-01 | 100.0% | 59.4% |
| 5012118 | 232.1.1.0 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein | 0.56 | 44.0 | 2.86e-01 | 89.4% | 28.6% |
| 5039835 | 708.1.2.4 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › NTP_transf_9 | 0.55 | 39.0 | 3.81e-01 | 75.8% | 74.7% |
| 1954221 | 2.26.1.1 ↗ | beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 | 0.55 | 38.0 | 3.76e-01 | 86.4% | 68.0% |
| 3924864 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.55 | 42.0 | 3.52e-01 | 89.4% | 82.3% |
| 3993450 | 9.3.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like | 0.54 | 42.0 | 3.69e-01 | 89.4% | 59.1% |
| 3869486 | 5.1.4.13 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP | 0.54 | 42.0 | 2.70e-01 | 90.9% | 32.1% |
| 2526900 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.54 | 46.0 | 2.75e-01 | 100.0% | 82.9% |
| 3463266 | 4325.1.1.0 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like | 0.54 | 36.0 | 3.75e-01 | 81.8% | 78.3% |
| 4608992 | 243.1.1.1 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Ring_hydroxyl_B | 0.53 | 43.0 | 3.32e-01 | 92.4% | 96.2% |
| 3780836 | 5.1.4.257 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP, FG-GAP_3 | 0.53 | 44.0 | 2.79e-01 | 100.0% | 74.4% |
| 3437883 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.53 | 41.0 | 3.87e-01 | 90.9% | 87.1% |
| 152420 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.52 | 44.0 | 2.71e-01 | 100.0% | 34.6% |
| 3937433 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.52 | 41.0 | 3.44e-01 | 90.9% | 84.0% |
| 3977065 | 3413.1.1.1 ↗ | alpha bundles › Inositol phosphate phosphatase sopB N-terminal domain › Inositol phosphate phosphatase sopB N-terminal domain › Inositol phosphate phosphatase sopB N-terminal domain › IpgD | 0.52 | 43.0 | 2.78e-01 | 100.0% | 88.6% |
| 3505303 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 40.0 | 3.59e-01 | 87.9% | 73.0% |
| 4500974 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.52 | 36.0 | 3.06e-01 | 74.2% | 67.5% |
| 134473 | 210.1.2.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › AAT | 0.51 | 41.0 | 2.83e-01 | 92.4% | 92.2% |
| 4029209 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.51 | 41.0 | 4.05e-01 | 95.5% | 85.7% |
| 4403166 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.50 | 39.0 | 3.98e-01 | 89.4% | 87.7% |
| 3632113 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.50 | 40.0 | 3.43e-01 | 92.4% | 68.7% |
| 2502895 | 2.27.1.0 ↗ | beta barrels › OB-fold | 0.50 | 43.0 | 4.18e-01 | 98.5% | 100.0% |