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MH825706.1__AYD86770.1__SEA_MICRODON_23__00023
Bact-VirMH825706.1__AYD86770.1__SEA_MICRODON_23__00023
Identity
- Accession:
- MH825706 ↗
- Kingdom:
- phage
Quality
68.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 9-59
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5vntA00 | 1.10.950.10 | Mainly Alpha › Orthogonal Bundle › Villin Headpiece Domain; Chain A › Villin headpiece domain | 0.65 | 51.0 | 4.76e-01 | 86.3% | 98.4% |
| 1obbA00 | 3.90.1820.10 | Alpha Beta › Alpha-Beta Complex › LDH C-terminal domain-like › AglA-like glucosidase | 0.61 | 43.0 | 2.51e-01 | 76.5% | 79.1% |
| 4g6dB02 | 6.10.140.1800 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 41.0 | 3.55e-01 | 72.5% | 45.7% |
| 2p9xA00 | 1.10.1200.200 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Protein of unknown function DUF3227 | 0.58 | 43.0 | 3.61e-01 | 84.3% | 49.0% |
| 3ragB00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.55 | 43.0 | 2.89e-01 | 90.2% | 65.9% |
| 2h1yB01 | 3.40.366.10 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 | 0.55 | 40.0 | 2.62e-01 | 80.4% | 70.8% |
| 3nksA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 42.0 | 2.50e-01 | 100.0% | 82.4% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3495987 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.70 | 50.0 | 3.33e-01 | 74.5% | 28.4% |
| 3344405 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 41.0 | 3.49e-01 | 82.4% | 37.5% |
| 4401280 | 6056.1.1.2 ↗ | alpha arrays › SP1917-like › SP1917-like › SP1917-like › PrmC_N | 0.65 | 46.0 | 4.24e-01 | 76.5% | 60.0% |
| 3711819 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.63 | 52.0 | 4.32e-01 | 96.1% | 57.9% |
| 3209577 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.55 | 40.0 | 3.86e-01 | 78.4% | 66.7% |
| 3694935 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.53 | 41.0 | 2.88e-01 | 90.2% | 76.3% |