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MH825707.1__AYD86879.1__SEA_MILLENIUMFORCE_54__00054
Bact-VirMH825707.1__AYD86879.1__SEA_MILLENIUMFORCE_54__00054
Identity
- Accession:
- MH825707 ↗
- Kingdom:
- phage
Quality
86.5
mean pLDDT
Taxonomy
TaxID: 2315711
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-59
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3u3wA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.95 | 76.0 | 6.60e-01 | 95.9% | 59.4% |
| 1y7yA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.95 | 81.0 | 7.05e-01 | 100.0% | 63.8% |
| 1y9qA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.95 | 80.0 | 6.45e-01 | 100.0% | 51.8% |
| 3f51C00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.94 | 79.0 | 6.28e-01 | 100.0% | 48.9% |
| 4pu7A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.92 | 78.0 | 6.72e-01 | 100.0% | 62.0% |
| 1b0nA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.89 | 69.0 | 5.31e-01 | 95.9% | 39.8% |
| 1x57A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.88 | 71.0 | 5.69e-01 | 95.9% | 47.3% |
| 4gqmA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.87 | 76.0 | 5.76e-01 | 100.0% | 43.8% |
| 2ictA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.84 | 71.0 | 5.92e-01 | 100.0% | 55.6% |
| 3fymA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.83 | 73.0 | 5.98e-01 | 93.9% | 59.8% |
| 3zhiA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.83 | 73.0 | 6.41e-01 | 100.0% | 69.9% |
| 2ef8A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.82 | 66.0 | 5.56e-01 | 100.0% | 52.4% |
| 4yg1A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.82 | 68.0 | 5.95e-01 | 100.0% | 62.5% |
| 1lliA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.75 | 64.0 | 5.32e-01 | 100.0% | 53.9% |
| 1dw9A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.72 | 62.0 | 5.16e-01 | 100.0% | 81.6% |
| 1uaaA02 | 1.10.10.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.70 | 56.0 | 4.87e-01 | 91.8% | 58.1% |
| 3umcD02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.68 | 45.0 | 3.84e-01 | 100.0% | 43.6% |
| 2bnkA00 | 1.10.8.600 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Phage phi29 replication organiser protein p16.7-like | 0.67 | 42.0 | 3.85e-01 | 95.9% | 48.4% |
| 1u78A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 48.0 | 4.95e-01 | 85.7% | 84.4% |
| 4c2uA02 | 1.10.10.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.66 | 55.0 | 4.63e-01 | 91.8% | 74.1% |
| 2p5kA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 51.0 | 4.70e-01 | 85.7% | 66.7% |
| 7s03A01 | 1.10.10.1450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.63 | 47.0 | 4.72e-01 | 81.6% | 84.0% |
| 4ivnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 42.0 | 3.66e-01 | 89.8% | 46.1% |
| 2mqkA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.61 | 51.0 | 4.74e-01 | 100.0% | 78.5% |
| 6dnwA01 | 3.90.1750.20 | Alpha Beta › Alpha-Beta Complex › Hect, E3 ligase catalytic domain fold › Putative Large Serine Recombinase; Chain B, Domain 2 | 0.60 | 51.0 | 3.82e-01 | 95.9% | 49.6% |
| 4eqqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 42.0 | 4.25e-01 | 79.6% | 85.4% |
| 3rdrA00 | 3.40.80.10 | Alpha Beta › 3-Layer(aba) Sandwich › Lysozyme-like › Peptidoglycan recognition protein-like | 0.57 | 44.0 | 3.30e-01 | 91.8% | 60.8% |
| 1yb0B00 | 3.40.80.10 | Alpha Beta › 3-Layer(aba) Sandwich › Lysozyme-like › Peptidoglycan recognition protein-like | 0.56 | 43.0 | 3.17e-01 | 91.8% | 62.3% |
| 3s4lA00 | 1.10.3210.30 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › | 0.55 | 46.0 | 3.05e-01 | 91.8% | 43.7% |
| 2w43A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 40.0 | 3.94e-01 | 85.7% | 100.0% |
| 4fcyA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.54 | 42.0 | 3.83e-01 | 100.0% | 97.4% |
| 2lbfB01 | 1.10.10.1410 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.53 | 41.0 | 3.85e-01 | 95.9% | 95.7% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4952630 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.95 | 80.0 | 6.80e-01 | 100.0% | 58.7% |
| 2157747 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.90 | 74.0 | 6.61e-01 | 100.0% | 65.7% |
| 1095365 | 101.1.4.16 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_25 | 0.87 | 76.0 | 5.75e-01 | 100.0% | 43.8% |
| 3590023 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.87 | 78.0 | 6.02e-01 | 100.0% | 48.0% |
| 3487276 | 101.1.4.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Pou | 0.86 | 77.0 | 5.96e-01 | 100.0% | 53.3% |
| 4008447 | 101.1.4.47 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF1456 | 0.85 | 72.0 | 6.06e-01 | 93.9% | 63.7% |
| 3982126 | 101.1.4.47 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF1456 | 0.80 | 71.0 | 5.85e-01 | 98.0% | 60.0% |
| 3987150 | 101.1.1.382 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DDE_Tnp_IS66 | 0.80 | 63.0 | 6.31e-01 | 85.7% | 88.0% |
| 4929680 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 60.0 | 5.60e-01 | 85.7% | 66.7% |
| 3283697 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.78 | 66.0 | 5.10e-01 | 100.0% | 68.7% |
| 3988910 | 101.1.1.382 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DDE_Tnp_IS66 | 0.77 | 60.0 | 6.28e-01 | 85.7% | 93.3% |
| 3590474 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 59.0 | 4.87e-01 | 85.7% | 48.2% |
| 4928271 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 56.0 | 6.12e-01 | 81.6% | 97.5% |
| 4945040 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 59.0 | 5.50e-01 | 85.7% | 68.3% |
| 3899987 | 101.1.1.12 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc3_2 | 0.75 | 60.0 | 4.90e-01 | 85.7% | 49.4% |
| 2036845 | 3546.1.1.1 ↗ | alpha arrays › Peroxisomal biogenesis factor 14 N-terminal domain › Peroxisomal biogenesis factor 14 N-terminal domain › Peroxisomal biogenesis factor 14 N-terminal domain › Pex14_N | 0.74 | 55.0 | 4.92e-01 | 81.6% | 55.7% |
| 3196401 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 53.0 | 5.13e-01 | 81.6% | 69.1% |
| 4946654 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 58.0 | 5.45e-01 | 89.8% | 71.7% |
| 4944585 | 101.1.2.872 ↗ | alpha arrays › HTH › HTH › winged helix domain › rve | 0.72 | 58.0 | 5.45e-01 | 89.8% | 71.7% |
| 3990863 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.70 | 62.0 | 4.18e-01 | 95.9% | 49.4% |
| 3946360 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.69 | 61.0 | 5.49e-01 | 95.9% | 83.1% |
| 3257352 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.69 | 57.0 | 4.99e-01 | 100.0% | 92.5% |
| 3998215 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.68 | 54.0 | 4.67e-01 | 85.7% | 56.0% |
| 5029930 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 58.0 | 4.58e-01 | 93.9% | 62.0% |
| 3934874 | 101.1.1.396 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Arg_repressor | 0.67 | 59.0 | 5.71e-01 | 95.9% | 87.3% |
| 5029219 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 56.0 | 5.44e-01 | 95.9% | 85.5% |
| 3969119 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.66 | 53.0 | 5.11e-01 | 89.8% | 81.8% |
| 5079733 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 54.0 | 4.66e-01 | 89.8% | 65.3% |
| 5074546 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 56.0 | 4.66e-01 | 95.9% | 57.6% |
| 5044657 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 55.0 | 5.20e-01 | 95.9% | 83.3% |
| 3724068 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 50.0 | 4.93e-01 | 89.8% | 80.0% |
| 3632179 | 592.2.1.0 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like | 0.65 | 49.0 | 4.35e-01 | 85.7% | 89.3% |
| 3983493 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.65 | 53.0 | 5.33e-01 | 89.8% | 90.0% |
| 3981939 | 101.1.1.202 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_21 | 0.64 | 52.0 | 5.05e-01 | 89.8% | 81.8% |
| 3590551 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.64 | 53.0 | 5.31e-01 | 91.8% | 92.0% |
| 3984964 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.64 | 52.0 | 4.55e-01 | 89.8% | 60.0% |
| 4979742 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 54.0 | 4.58e-01 | 93.9% | 60.0% |
| 3942167 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.63 | 52.0 | 4.89e-01 | 91.8% | 81.7% |
| 4008378 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.62 | 50.0 | 4.90e-01 | 91.8% | 83.6% |
| 4013698 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.61 | 49.0 | 4.53e-01 | 91.8% | 89.2% |
| 3881313 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 48.0 | 4.47e-01 | 89.8% | 67.7% |
| 4978129 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.61 | 51.0 | 2.99e-01 | 95.9% | 12.7% |
| 3890613 | 101.1.2.698 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27079 | 0.61 | 48.0 | 4.46e-01 | 89.8% | 67.7% |
| 3475184 | 101.26.1.1 ↗ | alpha arrays › HTH › Tex N-terminal domain › Tex N-terminal domain › Tex_N | 0.60 | 50.0 | 4.76e-01 | 95.9% | 91.7% |
| 4034503 | 101.26.1.1 ↗ | alpha arrays › HTH › Tex N-terminal domain › Tex N-terminal domain › Tex_N | 0.60 | 51.0 | 4.64e-01 | 95.9% | 86.2% |
| 3544446 | 101.26.1.1 ↗ | alpha arrays › HTH › Tex N-terminal domain › Tex N-terminal domain › Tex_N | 0.58 | 47.0 | 4.48e-01 | 93.9% | 90.0% |
| 3420661 | 592.7.1.0 ↗ | alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain | 0.57 | 47.0 | 3.97e-01 | 93.9% | 70.6% |
| 4984058 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.57 | 42.0 | 4.37e-01 | 81.6% | 95.6% |
| 3966077 | 101.26.1.1 ↗ | alpha arrays › HTH › Tex N-terminal domain › Tex N-terminal domain › Tex_N | 0.56 | 46.0 | 4.16e-01 | 93.9% | 87.1% |
| 3629800 | 101.26.1.1 ↗ | alpha arrays › HTH › Tex N-terminal domain › Tex N-terminal domain › Tex_N | 0.56 | 45.0 | 4.31e-01 | 95.9% | 95.0% |
| 3218213 | 101.26.1.1 ↗ | alpha arrays › HTH › Tex N-terminal domain › Tex N-terminal domain › Tex_N | 0.55 | 43.0 | 4.12e-01 | 93.9% | 95.0% |
| 4499345 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.54 | 41.0 | 4.09e-01 | 83.7% | 86.0% |