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MH825711.1__AYD87296.1__SEA_TENNO_83__00083
Bact-VirMH825711.1__AYD87296.1__SEA_TENNO_83__00083
Identity
- Accession:
- MH825711 ↗
- Kingdom:
- phage
Quality
71.1
mean pLDDT
Taxonomy
TaxID: 2315702
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-35
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jneA00 | 2.10.290.10 | Mainly Beta › Ribbon › Rubredoxin-like › YfgJ-like | 0.60 | 48.0 | 4.02e-01 | 100.0% | 63.4% |
| 1ltlA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.59 | 48.0 | 4.47e-01 | 100.0% | 89.8% |
| 4tpuA02 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.58 | 45.0 | 4.53e-01 | 94.3% | 100.0% |
| 1kk1A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 43.0 | 2.90e-01 | 100.0% | 18.9% |
| 2l1aA00 | 3.10.20.530 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.54 | 44.0 | 3.28e-01 | 100.0% | 37.4% |
| 1p6oA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.53 | 44.0 | 2.91e-01 | 100.0% | 36.5% |
| 3gqqA00 | 2.70.50.40 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › GMP phosphodiesterase, delta subunit | 0.51 | 43.0 | 2.83e-01 | 100.0% | 28.1% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5063434 | 375.1.1.48 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF35_N | 0.60 | 49.0 | 4.67e-01 | 100.0% | 77.8% |
| 3574854 | 375.1.1.267 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Mcm10, zf-CCCH_Mcm10 | 0.60 | 51.0 | 3.91e-01 | 100.0% | 85.9% |
| 5007824 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 49.0 | 4.77e-01 | 100.0% | 87.5% |
| 4019034 | 375.1.1.22 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DNA_RNApol_7kD | 0.57 | 46.0 | 4.53e-01 | 94.3% | 90.0% |
| 4975421 | 304.135.1.0 ↗ | a+b two layers › Alpha-beta plaits › O-phosphoseryl-tRNA synthetase C-terminal domain › O-phosphoseryl-tRNA synthetase C-terminal domain | 0.57 | 42.0 | 2.88e-01 | 100.0% | 75.6% |
| 3689410 | 109.4.1.1856 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_TBCD_2nd | 0.55 | 47.0 | 2.73e-01 | 100.0% | 10.6% |
| 3576729 | 375.1.1.146 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CCCH_Mcm10 | 0.54 | 38.0 | 3.65e-01 | 97.1% | 67.3% |
| 3495929 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 46.0 | 2.58e-01 | 100.0% | 14.8% |
| 3708288 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 41.0 | 4.10e-01 | 100.0% | 97.1% |
| 3940759 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.52 | 42.0 | 3.29e-01 | 100.0% | 43.3% |
| 3233799 | 375.1.1.146 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CCCH_Mcm10 | 0.52 | 36.0 | 3.65e-01 | 97.1% | 92.5% |
| 3596630 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.50 | 35.0 | 3.56e-01 | 88.6% | 94.3% |