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MH825712.1__AYD87381.1__SEA_VALENTINIPUFF_86__00086

Bact-Vir

MH825712.1__AYD87381.1__SEA_VALENTINIPUFF_86__00086

Identity

Accession:
MH825712 ↗
Kingdom:
phage

Quality

62.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 35-121
PDB
D2 high residues 134-196
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4nqwB00 1.10.10.1320 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Anti-sigma factor, zinc-finger domain 0.56 38.0 3.71e-01 88.9% 61.6%
1ku9B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 37.0 3.40e-01 71.4% 59.8%
2r8qA00 1.10.1300.10 Mainly Alpha › Orthogonal Bundle › Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b › 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain 0.52 40.0 2.66e-01 92.1% 61.5%
3c18A02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.51 40.0 3.31e-01 87.3% 66.1%
1q77A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.50 39.0 3.07e-01 85.7% 47.1%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3596811 3444.2.1.0 alpha arrays › DP domain › XPC-binding domain and DDI helical domain › XPC-binding domain 0.54 40.0 4.08e-01 79.4% 88.3%
3435195 2484.1.1.21 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › BcrAD_BadFG 0.51 37.0 2.65e-01 98.4% 23.9%
3955500 101.1.2.655 alpha arrays › HTH › HTH › winged helix domain › DUF732 0.50 37.0 3.52e-01 82.5% 87.2%