←Back to structures
MH825712.1__AYD87394.1__SEA_VALENTINIPUFF_100__00100
Bact-VirMH825712.1__AYD87394.1__SEA_VALENTINIPUFF_100__00100
Identity
- Accession:
- MH825712 ↗
- Kingdom:
- phage
Quality
92.2
mean pLDDT
Taxonomy
TaxID: 2315705
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 32-88
Domain cluster:
rep: NC_024138.1__YP_009031538.1__FH33_gp028__00028__D40-95
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3pvlA04 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 53.0 | 4.42e-01 | 98.2% | 79.8% |
| 3pieC05 | 2.170.260.40 | Mainly Beta › Beta Complex › paz domain › | 0.60 | 44.0 | 3.20e-01 | 80.7% | 43.7% |
| 4l8jA01 | 2.40.420.20 | Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › | 0.59 | 48.0 | 4.03e-01 | 91.2% | 89.8% |
| 4ebrA00 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.58 | 43.0 | 3.16e-01 | 80.7% | 67.5% |
| 4ebgA00 | 3.10.450.560 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 40.0 | 3.47e-01 | 77.2% | 54.6% |
| 2wr7C01 | 3.90.20.10 | Alpha Beta › Alpha-Beta Complex › Hemagglutinin Ectodomain; Chain B › | 0.57 | 38.0 | 2.52e-01 | 70.2% | 87.0% |
| 8eg0B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 43.0 | 2.70e-01 | 93.0% | 14.3% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.55 | 45.0 | 3.49e-01 | 94.7% | 91.4% |
| 1txdA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 43.0 | 3.52e-01 | 93.0% | 82.6% |
| 1l8rA00 | 3.10.260.20 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Ski | 0.52 | 39.0 | 3.23e-01 | 80.7% | 54.5% |
| 2fclA00 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.52 | 40.0 | 3.05e-01 | 87.7% | 82.7% |
| 3u50C01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 39.0 | 3.24e-01 | 91.2% | 46.5% |
| 2lkoA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 40.0 | 3.18e-01 | 93.0% | 61.6% |
| 1d5aA01 | 3.30.342.10 | Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 | 0.51 | 35.0 | 2.71e-01 | 75.4% | 76.8% |
| 3pe5A00 | 3.40.630.190 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › LCP protein | 0.51 | 38.0 | 2.54e-01 | 86.0% | 34.7% |
| 3euoA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.51 | 35.0 | 2.63e-01 | 73.7% | 28.0% |
| 2ox7A02 | 2.30.30.290 | Mainly Beta › Roll › SH3 type barrels. › YopX-like domains | 0.51 | 35.0 | 3.36e-01 | 73.7% | 75.4% |
| 3p0cA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.51 | 37.0 | 3.07e-01 | 78.9% | 64.9% |
| 1x1fA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 41.0 | 3.23e-01 | 100.0% | 70.5% |
| 2gffA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 39.0 | 3.37e-01 | 96.5% | 52.1% |
| 5cygB00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.50 | 36.0 | 2.37e-01 | 78.9% | 59.3% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4979786 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.64 | 43.0 | 3.43e-01 | 70.2% | 35.0% |
| 3655992 | 109.4.1.403 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Foie-gras_1 | 0.63 | 52.0 | 3.41e-01 | 89.5% | 25.5% |
| 3958996 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.62 | 52.0 | 3.45e-01 | 94.7% | 27.1% |
| 5016676 | 2007.1.1.15 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › DUF2124 | 0.61 | 46.0 | 3.38e-01 | 82.5% | 40.5% |
| 3931122 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 49.0 | 4.20e-01 | 98.2% | 83.2% |
| 943 | 220.1.1.47 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 | 0.57 | 45.0 | 3.85e-01 | 91.2% | 83.0% |
| 5002402 | 3153.1.1.0 ↗ | a+b two layers › PipX › PipX › PipX | 0.57 | 42.0 | 3.95e-01 | 82.5% | 66.7% |
| 3324949 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 42.0 | 3.48e-01 | 80.7% | 47.6% |
| 3346721 | 2.1.1.42 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C | 0.56 | 43.0 | 3.42e-01 | 87.7% | 70.8% |
| 4876714 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.56 | 41.0 | 2.87e-01 | 82.5% | 89.7% |
| 2989643 | 5.1.3.154 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF30361 | 0.55 | 43.0 | 2.70e-01 | 93.0% | 14.2% |
| 3482252 | 220.1.1.5 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PID | 0.55 | 44.0 | 3.40e-01 | 91.2% | 92.1% |
| 3889378 | 386.1.1.9 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-U1 | 0.55 | 34.0 | 3.61e-01 | 86.0% | 72.0% |
| 3922240 | 3755.3.1.321 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › WHAMM-JMY_N | 0.54 | 37.0 | 3.13e-01 | 75.4% | 70.0% |
| 3507295 | 304.166.1.9 ↗ | a+b two layers › Alpha-beta plaits › Nup54 ferredoxin-like domain › Nup54 ferredoxin-like domain › PF29949 | 0.54 | 38.0 | 3.29e-01 | 77.2% | 70.0% |
| 3995179 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.53 | 33.0 | 3.51e-01 | 84.2% | 75.6% |
| 5058881 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 37.0 | 2.34e-01 | 75.4% | 33.5% |
| 5012330 | 2498.1.1.35 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M54 | 0.51 | 37.0 | 2.50e-01 | 77.2% | 59.6% |
| 3502008 | 101.1.2.506 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_NWD1 | 0.51 | 43.0 | 3.50e-01 | 98.2% | 99.1% |
| 5070684 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.51 | 42.0 | 3.02e-01 | 100.0% | 72.5% |
| 3621547 | 3696.1.1.0 ↗ | a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related | 0.51 | 39.0 | 3.75e-01 | 87.7% | 72.3% |
| 3181345 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.51 | 40.0 | 3.23e-01 | 89.5% | 80.8% |
| 3633309 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.51 | 40.0 | 2.43e-01 | 91.2% | 68.0% |
| None | — | 0.50 | 39.0 | 2.50e-01 | 86.0% | 38.7% |