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MH834614.1__AYN58136.1__PBI_JUDY_66__00066
Bact-VirMH834614.1__AYN58136.1__PBI_JUDY_66__00066
Identity
- Accession:
- MH834614 ↗
- Kingdom:
- phage
Quality
74.8
mean pLDDT
Taxonomy
TaxID: 2419958
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-64
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1cjaA02 | 1.10.1070.11 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain | 0.58 | 41.0 | 2.76e-01 | 74.5% | 48.0% |
| 1jj2Y00 | 2.20.25.30 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.58 | 38.0 | 3.40e-01 | 78.4% | 47.9% |
| 3u50C02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.56 | 33.0 | 3.81e-01 | 74.5% | 85.7% |
| 5cqgA04 | 3.30.70.2630 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 31.0 | 2.46e-01 | 78.4% | 23.6% |
| 3e70C01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.54 | 44.0 | 3.65e-01 | 94.1% | 83.5% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.54 | 36.0 | 3.62e-01 | 86.3% | 69.2% |
| 2jubA01 | 3.30.160.860 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 34.0 | 3.59e-01 | 80.4% | 89.2% |
| 4f9cA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.52 | 43.0 | 2.99e-01 | 96.1% | 91.3% |
| 6g4gD01 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.52 | 37.0 | 2.35e-01 | 76.5% | 22.0% |
| 2ysiA01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.52 | 31.0 | 3.59e-01 | 70.6% | 87.9% |
| 1floC02 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.51 | 40.0 | 2.62e-01 | 90.2% | 73.2% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3410793 | 398.1.1.0 ↗ | few secondary structure elements › Btk/CHORD zinc fingers › Btk/CHORD zinc fingers › Btk/CHORD zinc fingers | 0.64 | 37.0 | 4.06e-01 | 72.5% | 72.5% |
| 3259235 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 32.0 | 3.76e-01 | 72.5% | 80.0% |
| 3293898 | 3958.1.1.2 ↗ | extended segments › Cell division factor MciZ › Cell division factor MciZ › Cell division factor MciZ › Myb_DNA-bind_3 | 0.59 | 38.0 | 4.03e-01 | 82.4% | 75.6% |
| 3255203 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.57 | 32.0 | 3.52e-01 | 72.5% | 62.5% |
| 3691414 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.55 | 45.0 | 3.52e-01 | 92.2% | 41.8% |
| 3933130 | 7574.1.1.14 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › E1_dh+Transket_pyr | 0.55 | 43.0 | 2.36e-01 | 84.3% | 44.7% |
| 3668608 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.55 | 38.0 | 2.43e-01 | 72.5% | 78.5% |
| 3525415 | 398.1.1.0 ↗ | few secondary structure elements › Btk/CHORD zinc fingers › Btk/CHORD zinc fingers › Btk/CHORD zinc fingers | 0.55 | 34.0 | 3.63e-01 | 72.5% | 71.1% |
| 3602764 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.54 | 36.0 | 2.34e-01 | 72.5% | 28.1% |
| 3936596 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.54 | 33.0 | 2.86e-01 | 84.3% | 33.3% |
| 3315837 | 148.1.3.276 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Myb_DNA-bind_3 | 0.53 | 40.0 | 3.70e-01 | 84.3% | 80.0% |
| 4359679 | 376.1.1.37 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › SLX1_C | 0.52 | 40.0 | 3.70e-01 | 90.2% | 94.3% |
| 4028093 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 32.0 | 2.44e-01 | 78.4% | 24.0% |
| 4165569 | 245.1.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C | 0.51 | 39.0 | 3.22e-01 | 86.3% | 85.0% |
| 3681026 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.51 | 42.0 | 2.82e-01 | 98.0% | 64.7% |
| 3636943 | 109.4.1.447 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PI4K_N | 0.50 | 43.0 | 2.44e-01 | 100.0% | 14.6% |