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MH837543.1__AYN56749.1__X__00001
Bact-VirMH837543.1__AYN56749.1__X__00001
Identity
- Accession:
- MH837543 ↗
- Kingdom:
- phage
Quality
90.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 216-393
Domain cluster:
rep: NC_041875.1__YP_009594310.1__FDG92_gp21__00021__D5-180
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01510.31 best | Amidase_2 | 41.7 | 1.90e-10 | 75.3% | 94.6% |
D2
medium
residues 134-212
Domain cluster:
rep: KU981050.1__ANU78868.1__X__00018__D235-305
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01473.27 best | Choline_bind_1 | 9.9 | 1.50e+00 | 20.2% | 79.0% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4tvcA01 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.88 | 71.0 | 5.20e-01 | 86.1% | 35.6% |
| 5ngyA01 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.82 | 71.0 | 6.39e-01 | 94.9% | 70.2% |
| 2j8gA02 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.79 | 64.0 | 6.34e-01 | 86.1% | 100.0% |
| 3hiaA00 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.77 | 60.0 | 6.52e-01 | 97.5% | 100.0% |
| 3klkA01 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.77 | 67.0 | 5.27e-01 | 96.2% | 48.4% |
| 2g7cB01 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.76 | 60.0 | 6.47e-01 | 87.3% | 100.0% |
| 7v1nA02 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.75 | 68.0 | 5.99e-01 | 100.0% | 87.6% |
| 6jyxA01 | 2.10.270.20 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › | 0.74 | 64.0 | 5.51e-01 | 94.9% | 90.3% |
| 2v05A02 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.74 | 67.0 | 5.19e-01 | 100.0% | 61.5% |
| 2g7cA02 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.73 | 63.0 | 6.01e-01 | 93.7% | 87.9% |
| 2v05A01 | 2.10.270.20 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › | 0.73 | 63.0 | 5.33e-01 | 94.9% | 88.3% |
| 2qj6A01 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.67 | 58.0 | 5.01e-01 | 100.0% | 77.3% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1772988 | 702.1.1.7 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_3 | 0.90 | 71.0 | 5.18e-01 | 83.5% | 34.2% |
| 4505171 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.89 | 79.0 | 4.96e-01 | 96.2% | 20.8% |
| 4457120 | 702.1.1.7 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_3 | 0.87 | 75.0 | 6.50e-01 | 94.9% | 62.6% |
| 3987219 | 702.1.1.9 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1, Choline_bind_2, Choline_bind_3 | 0.85 | 70.0 | 7.18e-01 | 96.2% | 90.7% |
| 4591362 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.85 | 79.0 | 5.80e-01 | 100.0% | 50.5% |
| 4051792 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.84 | 76.0 | 6.88e-01 | 97.5% | 89.5% |
| 2138976 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.84 | 74.0 | 7.49e-01 | 100.0% | 97.4% |
| 4819490 | 702.1.1.3 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1,Choline_bind_2 | 0.83 | 77.0 | 5.96e-01 | 100.0% | 61.9% |
| 2125354 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.82 | 74.0 | 6.30e-01 | 100.0% | 62.1% |
| 4287737 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.82 | 75.0 | 4.87e-01 | 100.0% | 30.3% |
| 2883161 | 702.1.1.3 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1,Choline_bind_2 | 0.81 | 73.0 | 5.77e-01 | 100.0% | 58.5% |
| 3988987 | 702.1.1.3 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1,Choline_bind_2 | 0.80 | 75.0 | 6.87e-01 | 100.0% | 89.0% |
| 2266 | 702.1.1.9 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1, Choline_bind_2, Choline_bind_3 | 0.80 | 74.0 | 5.15e-01 | 100.0% | 38.4% |
| 3987255 | 702.1.1.3 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1,Choline_bind_2 | 0.80 | 73.0 | 5.06e-01 | 100.0% | 38.4% |
| 4396385 | 702.1.1.0 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.79 | 73.0 | 4.48e-01 | 100.0% | 22.4% |
| 2905750 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.79 | 73.0 | 4.57e-01 | 100.0% | 27.0% |
| 2453130 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.79 | 72.0 | 4.99e-01 | 100.0% | 38.1% |
| 4271349 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.79 | 71.0 | 4.84e-01 | 98.7% | 37.0% |
| 3987218 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.78 | 72.0 | 5.57e-01 | 100.0% | 55.2% |
| 1292985 | 702.1.1.1 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1 | 0.78 | 68.0 | 5.91e-01 | 93.7% | 83.8% |
| 4792422 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.78 | 71.0 | 4.86e-01 | 98.7% | 38.1% |
| 2531530 | 702.1.1.0 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.78 | 71.0 | 5.56e-01 | 100.0% | 51.5% |
| 4878267 | 702.1.1.7 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_3 | 0.78 | 62.0 | 6.63e-01 | 96.2% | 98.6% |
| 1292986 | 702.1.1.1 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1 | 0.78 | 72.0 | 5.65e-01 | 100.0% | 66.5% |
| 3987354 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.78 | 70.0 | 6.68e-01 | 97.5% | 88.9% |
| 2905753 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.77 | 70.0 | 5.34e-01 | 98.7% | 58.0% |
| 4135591 | 702.1.1.1 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1 | 0.77 | 70.0 | 4.34e-01 | 100.0% | 22.8% |
| 4596105 | 702.1.1.1 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1 | 0.77 | 68.0 | 5.89e-01 | 96.2% | 75.0% |
| 369186 | 702.1.1.9 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1, Choline_bind_2, Choline_bind_3 | 0.77 | 66.0 | 6.54e-01 | 92.4% | 100.0% |
| 4527800 | 1033.1.1.3 ↗ | beta duplicates or obligate multimers › Toxin A (TcdA) delivery domain › Toxin A (TcdA) delivery domain › Toxin A (TcdA) delivery domain › TcdA_TcdB_pore, PF30720 | 0.77 | 70.0 | 3.90e-01 | 98.7% | 16.2% |
| 4662378 | 1032.1.1.0 ↗ | alpha arrays › Toxin A (TcdA) helical domain › Toxin A (TcdA) helical domain › Toxin A (TcdA) helical domain | 0.77 | 69.0 | 3.85e-01 | 97.5% | 15.6% |
| 3989167 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.76 | 70.0 | 6.46e-01 | 100.0% | 87.0% |
| 4514947 | 1032.1.1.0 ↗ | alpha arrays › Toxin A (TcdA) helical domain › Toxin A (TcdA) helical domain › Toxin A (TcdA) helical domain | 0.75 | 69.0 | 3.79e-01 | 100.0% | 8.9% |
| 4802915 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.75 | 63.0 | 6.49e-01 | 91.1% | 97.3% |
| 2265 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.74 | 66.0 | 5.36e-01 | 100.0% | 52.3% |
| 1408358 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.74 | 67.0 | 4.86e-01 | 100.0% | 51.4% |
| 1773021 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.74 | 67.0 | 4.45e-01 | 100.0% | 29.3% |
| 4878265 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.73 | 65.0 | 5.68e-01 | 98.7% | 73.7% |
| 1822971 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.72 | 64.0 | 4.26e-01 | 100.0% | 34.4% |
| 1140094 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.71 | 65.0 | 5.65e-01 | 100.0% | 81.4% |
| 3990241 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.60 | 32.0 | 4.13e-01 | 70.9% | 95.3% |
| 4021058 | 270.1.1.2 ↗ | beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Formyl_trans_C | 0.58 | 33.0 | 2.99e-01 | 74.7% | 40.0% |
| 4588738 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.52 | 32.0 | 3.13e-01 | 86.1% | 55.3% |