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MH884508.1__AYP68154.1__vBBcoS136_00022__00022

Bact-Vir

MH884508.1__AYP68154.1__vBBcoS136_00022__00022

Identity

Accession:
MH884508 ↗
Kingdom:
phage

Quality

73.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Kenyattavirus› Bacillus_phage_vB_BcoS-136

TaxID: 2419619

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-55
PDB
D2 medium residues 56-109
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2in3A02 1.10.472.60 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › putative protein disulfide isomerase domain 0.62 52.0 4.13e-01 100.0% 65.9%
2z3xA00 6.10.10.80 Special › Helix non-globular › Helicase, Ruva Protein; domain 3 › Small, acid-soluble spore protein, alpha/beta type-like 0.61 47.0 4.73e-01 100.0% 82.1%
1tfeA02 1.10.286.20 Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › 0.61 42.0 4.56e-01 100.0% 86.7%
4at7B02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.61 50.0 3.53e-01 96.3% 39.8%
3vkhB01 1.10.287.2620 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.60 47.0 4.60e-01 100.0% 82.8%
1wi9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 42.0 4.13e-01 75.9% 74.1%
4n6cB00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.58 51.0 3.57e-01 100.0% 69.6%
2ef8A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.57 49.0 4.25e-01 98.1% 63.1%
1v1gA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.56 43.0 3.05e-01 87.0% 40.4%
4nzpA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.54 44.0 3.47e-01 100.0% 84.8%
2ld5A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.53 39.0 3.71e-01 83.3% 74.6%
3w5mA05 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.53 44.0 2.79e-01 100.0% 46.6%
3dteA02 1.10.10.1030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IrrE, HTH domain 0.52 35.0 3.70e-01 72.2% 97.6%
1nv8B01 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.51 40.0 3.80e-01 94.4% 78.9%
1biaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 36.0 3.49e-01 79.6% 67.2%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4146096 181.1.1.0 ↗ alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins 0.71 46.0 4.01e-01 100.0% 45.0%
4290529 4336.1.1.1 ↗ alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF 0.66 45.0 3.51e-01 70.4% 34.5%
4209030 4336.1.1.1 ↗ alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF 0.66 43.0 3.35e-01 70.4% 32.5%
147067 3276.1.1.1 ↗ alpha arrays › N-terminal domain in MogR repressor › N-terminal domain in MogR repressor › N-terminal domain in MogR repressor › MogR_DNAbind 0.64 50.0 4.76e-01 90.7% 71.9%
3926720 130.1.1.0 ↗ alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif 0.64 52.0 4.97e-01 96.3% 81.5%
3010699 3276.1.1.0 ↗ alpha arrays › N-terminal domain in MogR repressor › N-terminal domain in MogR repressor › N-terminal domain in MogR repressor 0.63 48.0 4.61e-01 90.7% 72.1%
4130073 4336.1.1.1 ↗ alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF 0.60 45.0 3.53e-01 79.6% 54.5%
3455096 3722.1.1.1 ↗ alpha bundles › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › MAP65_ASE1 0.60 51.0 3.36e-01 100.0% 23.1%
3479895 4015.1.1.0 ↗ alpha complex topology › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins 0.59 47.0 3.20e-01 88.9% 28.2%
1693527 3009.2.1.0 ↗ alpha arrays › Insertion subdomain in DsbA-like › STAC domain › STAC domain 0.59 44.0 4.22e-01 87.0% 95.6%
4066056 4336.1.1.1 ↗ alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF 0.58 43.0 3.38e-01 79.6% 52.2%
4989195 601.7.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.56 46.0 3.66e-01 94.4% 65.2%
4270265 4336.1.1.1 ↗ alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF 0.55 47.0 3.84e-01 94.4% 92.0%
3829031 193.1.1.3 ↗ alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › Ndc80_HEC 0.54 48.0 3.82e-01 100.0% 59.1%
4954671 601.7.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.54 46.0 3.47e-01 100.0% 67.1%
3645717 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.51 43.0 3.17e-01 92.6% 49.3%
3309800 103.1.1.0 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.50 42.0 3.72e-01 100.0% 65.3%