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MH884508.1__AYP68165.1__vBBcoS136_00033__00033

Bact-Vir

MH884508.1__AYP68165.1__vBBcoS136_00033__00033

Identity

Accession:
MH884508 ↗
Kingdom:
phage

Quality

90.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 5-111
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kgfA00 1.10.375.10 Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein 0.59 41.0 3.79e-01 92.5% 55.0%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5044666 101.1.8.2 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Topoisom_I 0.57 42.0 3.65e-01 75.7% 78.1%
3700547 109.4.1.22 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N 0.57 46.0 2.92e-01 90.7% 30.5%
3253057 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 39.0 3.46e-01 74.8% 86.5%
3938116 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.53 36.0 2.82e-01 71.0% 82.7%
3212968 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.53 39.0 3.66e-01 79.4% 88.9%
4590279 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.51 39.0 2.81e-01 81.3% 65.5%
3933293 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.50 28.0 3.61e-01 93.5% 100.0%